RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GDPGP1Q6ZNW5 385 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 PGAP1Q75T13 922 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 CLVS1Q8IUQ0 354 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-203ENST00000449049 OR13C3Q8NGS6 347 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 SPOCK3Q9BQ16 436 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 TMEM204Q9BSN7 226 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 NAA50Q9GZZ1 169 aaKnown RBP12.08□□□□□ -0.48
SHMT2-203ENST00000449049 DHDHQ9UQ10 334 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 RNF115Q9Y4L5 304 aa12.08□□□□□ -0.48
SHMT2-203ENST00000449049 TRBV5-7A0A0A0MS05 114 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 AIREO43918 545 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 LMX1BO60663 402 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 GSK3AP49840 483 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 RPS23P62266 143 aaKnown RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 DAZAP2Q15038 168 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 ZMAT1Q5H9K5 638 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 RGS7BPQ6MZT1 257 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 KLF14Q8TD94 323 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 TMEM171Q8WVE6 324 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 PHYHIPQ92561 330 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 RPL3LQ92901 407 aaKnown RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 DERL3Q96Q80 235 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 CHCHD6Q9BRQ6 235 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF275Q9NSD4 429 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 TXNL4BQ9NX01 149 aaKnown RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 SSR3Q9UNL2 185 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF701M0R085 212 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 RAC2P15153 192 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 ACKR3P25106 362 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 MAPK3P27361 379 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-203ENST00000449049 SOX2P48431 317 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 TMBIM6P55061 237 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF718Q3SXZ3 478 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 PAMR1Q6UXH9 720 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 CEACAM19Q7Z692 300 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 SEMA6DQ8NFY4 1073 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 KBTBD8Q8NFY9 601 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 TMEM106AQ96A25 262 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 C10orf35Q96D05 121 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 HS3ST6Q96QI5 342 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
SHMT2-203ENST00000449049 UCHL1P09936 223 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF250P15622 560 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 THBS4P35443 961 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 MPV17P39210 176 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 MAP2K3P46734 347 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 PRSS12P56730 875 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 CTF1Q16619 201 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 MSMPQ1L6U9 139 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 KRT74Q7RTS7 529 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 PARP16Q8N5Y8 322 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF420Q8TAQ5 688 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-203ENST00000449049 HAVCR1Q96D42 359 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 CMBLQ96DG6 245 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 BCL7BQ9BQE9 202 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 CENPOQ9BU64 300 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 PPIL3Q9H2H8 161 aaKnown RBP12.06□□□□□ -0.48
SHMT2-203ENST00000449049 EXOSC4Q9NPD3 245 aaKnown RBP12.06□□□□□ -0.48
SHMT2-203ENST00000449049 CA10Q9NS85 328 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 KCNN3Q9UGI6 736 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 PRR14LQ5THK1 2151 aa12.06□□□□□ -0.48
SHMT2-203ENST00000449049 LOC100506127A0A0U1RQW1 187 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 PIN1P1O15428 100 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 GOSR1O95249 250 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 RAF1P04049 648 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 CD2P06729 351 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 RIPPLY1Q0D2K3 151 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 PSG7Q13046 419 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 TMEM255AQ5JRV8 349 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 ZBTB37Q5TC79 503 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 C22orf42Q6IC83 251 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 RAB2BQ8WUD1 216 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 ADAT3Q96EY9 351 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-203ENST00000449049 PLEKHA1Q9HB21 404 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 NOX4Q9NPH5 578 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 PIGLQ9Y2B2 252 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 GGT3PA6NGU5 568 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 CD300LBA8K4G0 201 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 PLAUP00749 431 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 SELEP16581 610 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 KITLGP21583 273 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 DDOSTP39656 456 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 FAM27D1Q5T7N8 215 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 LILRB1Q8NHL6 650 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-203ENST00000449049 FGGYQ96C11 551 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 ISOC1Q96CN7 298 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 POU2F3Q9UKI9 436 aa12.05□□□□□ -0.48
SHMT2-203ENST00000449049 IGLV3-9A0A075B6K5 115 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 IQCF6A8MYZ5 107 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 ARL6IP5O75915 188 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 FAHP16930 419 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 ZNF20P17024 532 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 FSTP19883 344 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 GCH1P30793 250 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 ASPHD2Q6ICH7 369 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 OR2T2Q6IF00 324 aa12.04□□□□□ -0.48
SHMT2-203ENST00000449049 VHLLQ6RSH7 139 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms