RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 KRTAP27-1Q3LI81 207 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 GLIPR1L1Q6UWM5 242 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 DRAM2Q6UX65 266 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 SLC16A14Q7RTX9 510 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 TMEM104Q8NE00 496 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 OR2AE1Q8NHA4 323 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 HAS2Q92819 552 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 SGK3Q96BR1 496 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 OR2H1Q9GZK4 316 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 WNT5BQ9H1J7 359 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 SCPEP1Q9HB40 452 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 ZNF224Q9NZL3 707 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 ICMTO60725 284 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 THBS4P35443 961 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 FAUP35544 74 aaKnown RBP15.25■□□□□ 0.03
SMC6-206ENST00000446852 ACTBP60709 375 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 ACTG1P63261 375 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 ECH1Q13011 328 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 UBE2V2Q15819 145 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 ZNF766Q5HY98 468 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 CD276Q5ZPR3 534 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 RTN4RL2Q86UN3 420 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 CDH26Q8IXH8 852 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 ZNF101Q8IZC7 436 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 OR52H1Q8NGJ2 320 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 OR8S1Q8NH09 359 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 NPRL2Q8WTW4 380 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 AQP3Q92482 292 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 DACT3Q96B18 629 aaPredicted RBP15.25■□□□□ 0.03
SMC6-206ENST00000446852 CALHM2Q9HA72 323 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 MCTS1Q9ULC4 181 aaKnown RBP15.25■□□□□ 0.03
SMC6-206ENST00000446852 PIGLQ9Y2B2 252 aa15.25■□□□□ 0.03
SMC6-206ENST00000446852 C1QBP02746 253 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 YES1P07947 543 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 AKAIN1P0CW23 69 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 HTR5AP47898 357 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 ZNF260Q3ZCT1 412 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 RAB12Q6IQ22 244 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 NICN1Q9BSH3 213 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 DEFB127Q9H1M4 99 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 OR10A2Q9H208 303 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 ACKR4Q9NPB9 350 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 PLSCR3Q9NRY6 295 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 KLK13Q9UKR3 277 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 TIMM10BQ9Y5J6 103 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 TNFRSF10AO00220 468 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 ATP6V1G1O75348 118 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 MMP7P09237 267 aaPredicted RBP15.24■□□□□ 0.03
SMC6-206ENST00000446852 RAD52P43351 418 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 SLC10A1Q14973 349 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 BCL2A1Q16548 175 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 Q6ZTK2 550 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 GABRG1Q8N1C3 465 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 FAM109AQ8N4B1 249 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 LINC00470Q9BZP3 86 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 CHST5Q9GZS9 411 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 EMC3Q9P0I2 261 aa15.24■□□□□ 0.03
SMC6-206ENST00000446852 A0A0A6YYD4 124 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 A0A1B0GUH1 482 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 A0A1W2PP11 408 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 CDK2AP1O14519 115 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 PRF1P14222 555 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 ANXA7P20073 488 aaKnown RBP15.23■□□□□ 0.03
SMC6-206ENST00000446852 ACKR3P25106 362 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 GZMKP49863 264 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 SF3B4Q15427 424 aaKnown RBP eCLIP15.23■□□□□ 0.031e-7■□□□□ 11.3
SMC6-206ENST00000446852 STEAP1BQ6NZ63 245 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 ZNF782Q6ZMW2 699 aaPredicted RBP15.23■□□□□ 0.03
SMC6-206ENST00000446852 FGD2Q7Z6J4 655 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 CDH24Q86UP0 819 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
SMC6-206ENST00000446852 OR51S1Q8NGJ8 323 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 GPER1Q99527 375 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 LPAR5Q9H1C0 372 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 BCO1Q9HAY6 547 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 DOCK7Q96N67 2140 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 TGM6O95932 706 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 TNFSF10P50591 281 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 FOXG1P55316 489 aaPredicted RBP15.23■□□□□ 0.03
SMC6-206ENST00000446852 KISS1Q15726 138 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 C9orf135Q5VTT2 229 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 LIX1LQ8IVB5 337 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 PP6455Q8WZ26 134 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 SEC22CQ9BRL7 303 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 PRRG4Q9BZD6 226 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 EXO5Q9H790 373 aa15.23■□□□□ 0.03
SMC6-206ENST00000446852 PYCARD-AS1I3L0S3 204 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 PRAF2O60831 178 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 ACTL6AO96019 429 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 SULT1A3P0DMM9 295 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 SULT1A4P0DMN0 295 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 PRSS12P56730 875 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 PCBD1P61457 104 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 ARF1P84077 181 aaKnown RBP15.22■□□□□ 0.03
SMC6-206ENST00000446852 FAPQ12884 760 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 RBMS2Q15434 407 aaKnown RBP15.22■□□□□ 0.03
SMC6-206ENST00000446852 OR2W3Q7Z3T1 314 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 CHST4Q8NCG5 386 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 OR5D18Q8NGL1 313 aa15.22■□□□□ 0.03
SMC6-206ENST00000446852 REEP6Q96HR9 211 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms