RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 B4E171 279 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 CD3EP07766 207 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 PNLIPP16233 465 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 TSPAN7P41732 249 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 SLC25A1P53007 311 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 DBPQ10586 325 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 ZNF774Q6NX45 483 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 Q6ZRG5 221 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 POFUT1Q9H488 388 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 GLRX2Q9NS18 164 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 COL11A2P13942 1736 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 SHANK3Q9BYB0 1731 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 ST8SIA3O43173 380 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 GNB3P16520 340 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 PTBP1P26599 531 aaKnown RBP eCLIP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 GPNMBQ14956 572 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 LYPD8Q6UX82 237 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 SEC22CQ9BRL7 303 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 ZNF436Q9C0F3 470 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 MYOZ1Q9NP98 299 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 EXOSC3Q9NQT5 275 aaKnown RBP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 GFRA3O60609 400 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 DFFBO76075 338 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 ZIC2O95409 532 aaPredicted RBP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 CCL17Q92583 94 aa15.96■□□□□ 0.15
ATG9A-215ENST00000446716 TNS1Q9HBL0 1735 aaKnown RBP15.96■□□□□ 0.15
ATG9A-215ENST00000446716 ARPC3O15145 178 aa15.96■□□□□ 0.14
ATG9A-215ENST00000446716 FCGR2CP31995 323 aa15.96■□□□□ 0.14
ATG9A-215ENST00000446716 RFX2P48378 723 aa15.96■□□□□ 0.14
ATG9A-215ENST00000446716 USF2Q15853 346 aaPredicted RBP15.96■□□□□ 0.14
ATG9A-215ENST00000446716 ARV1Q9H2C2 271 aa15.96■□□□□ 0.14
ATG9A-215ENST00000446716 OR5H8P0DN80 308 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 RELAQ04206 551 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 IL34Q6ZMJ4 242 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 AP1S3Q96PC3 154 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 WDR54Q9H977 334 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 RANGRFQ9HD47 186 aaPredicted RBP15.95■□□□□ 0.14
ATG9A-215ENST00000446716 COL4A1P02462 1669 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 ASPDHA6ND91 283 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 TMEM200CA6NKL6 621 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 AGFG2O95081 481 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 ACTL6AO96019 429 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 FABP5Q01469 135 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 OR4Q3Q8NH05 313 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 SLC35B4Q969S0 331 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 SPSB1Q96BD6 273 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 ARPC5LQ9BPX5 153 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 SULT1C2O00338 296 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 KLF3P57682 345 aaPredicted RBP15.95■□□□□ 0.14
ATG9A-215ENST00000446716 MSRB3Q8IXL7 192 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 Q8IYB0 196 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 GPR32P1Q8NGA4 272 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 ORAI1Q96D31 301 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 SLC26A1Q9H2B4 701 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 LIN7CQ9NUP9 197 aaKnown RBP15.95■□□□□ 0.14
ATG9A-215ENST00000446716 FAM186AA6NE01 2351 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 NCCRP1Q6ZVX7 275 aaPredicted RBP15.95■□□□□ 0.14
ATG9A-215ENST00000446716 UBAC2Q8NBM4 344 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 GALMQ96C23 342 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 TRMT61AQ96FX7 289 aaKnown RBP15.95■□□□□ 0.14
ATG9A-215ENST00000446716 PLAC1Q9HBJ0 212 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 RNF150Q9ULK6 438 aa15.95■□□□□ 0.14
ATG9A-215ENST00000446716 CRYBA1P05813 215 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 TBPP20226 339 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 CA6P23280 308 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 RHOUQ7L0Q8 258 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 C12orf10Q9HB07 376 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 ONECUT1Q9UBC0 465 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 PDGFBP01127 241 aaPredicted RBP15.94■□□□□ 0.14
ATG9A-215ENST00000446716 ZNF85Q03923 595 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 TPBGQ13641 420 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 COPS3Q9UNS2 423 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 RGPD4Q7Z3J3 1758 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 PPP3CBP16298 524 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 OR10A3P58181 314 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 MC2RQ01718 297 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 C3AR1Q16581 482 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 CORO2AQ92828 525 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 RAB1BQ9H0U4 201 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 C19orf12Q9NSK7 152 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 NEU3Q9UQ49 428 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 SP9P0CG40 484 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 DUSP1P28562 367 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 POU4F3Q15319 338 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 FCN2Q15485 313 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 SFTPA2Q8IWL1 248 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 OIT3Q8WWZ8 545 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 SCN4AP35499 1836 aa15.94■□□□□ 0.14
ATG9A-215ENST00000446716 CASP3P42574 277 aa15.93■□□□□ 0.14
ATG9A-215ENST00000446716 GP2P55259 537 aaKnown RBP15.93■□□□□ 0.14
ATG9A-215ENST00000446716 TNFAIP6P98066 277 aaPredicted RBP15.93■□□□□ 0.14
ATG9A-215ENST00000446716 OR10R2Q8NGX6 335 aa15.93■□□□□ 0.14
ATG9A-215ENST00000446716 VSTM2LQ96N03 204 aa15.93■□□□□ 0.14
ATG9A-215ENST00000446716 ZNF251Q9BRH9 671 aa15.93■□□□□ 0.14
ATG9A-215ENST00000446716 SIRT3Q9NTG7 399 aaPredicted RBP15.93■□□□□ 0.14
ATG9A-215ENST00000446716 NME2P22392 152 aa15.93■□□□□ 0.14
ATG9A-215ENST00000446716 ERHP84090 104 aaKnown RBP15.93■□□□□ 0.14
ATG9A-215ENST00000446716 DGCR2P98153 550 aa15.93■□□□□ 0.14
ATG9A-215ENST00000446716 TMEM30CPA0ZSE6 113 aa15.93■□□□□ 0.14
ATG9A-215ENST00000446716 K7EQM0 130 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms