RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	JMJD7	P0C870	316 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	MGMT	P16455	207 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	ABCD3	P28288	659 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	RGS19	P49795	217 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	EMP2	P54851	167 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	RPS4X	P62701	263 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	MFAP5	Q13361	173 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	REC114	Q7Z4M0	266 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF595	Q8IYB9	648 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	OR5M8	Q8NGP6	311 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	POC1B	Q8TC44	478 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	LMF2	Q9BU23	707 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	TAS2R8	Q9NYW2	309 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	UPB1	Q9UBR1	384 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	HHLA2	Q9UM44	414 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	CLDN16	Q9Y5I7	305 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	TRBV5-7	A0A0A0MS05	114 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	TMEM218	A2RU14	115 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	C9orf170	A2RU37	121 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	CRTAP	O75718	401 aa	Predicted RBP	11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	TXNDC12	O95881	172 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	UBB	P0CG47	229 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	UBC	P0CG48	685 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	SP6	Q3SY56	376 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	C14orf28	Q4W4Y0	310 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	EXD3	Q8N9H8	876 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	SLC2A4RG	Q9NR83	387 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	DNAJB11	Q9UBS4	358 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	RHBDD3	Q9Y3P4	386 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	RFNG	Q9Y644	331 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	CEP250	Q9BV73	2442 aa		11.17	□□□□□ -0.62
DDR1-238	ENST00000446312	PRR19	A6NJB7	356 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	NPIPA5	E9PKD4	350 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	TNFSF14	O43557	240 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	ITGB2	P05107	769 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF25	P17030	456 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	OR3A4P	P47883	348 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	SNU13	P55769	128 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	MRPS10	P82664	201 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	TIPARP	Q7Z3E1	657 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	MRPL38	Q96DV4	380 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	BSCL2	Q96G97	398 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	NPIPA1	Q9UND3	350 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	LSM5	Q9Y4Y9	91 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	GPR179	Q6PRD1	2367 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312		H0YIZ8	118 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	SULT2B1	O00204	365 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	LRP3	O75074	770 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	C1QL1	O75973	258 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	PNMT	P11086	282 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	SLC6A9	P48067	706 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	DHPS	P49366	369 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	CLDN6	P56747	220 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	RPL27	P61353	136 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	OR8G1	Q15617	311 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	CDPF1	Q6NVV7	123 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	ADAM5	Q6NVV9	412 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	ADGRE4P	Q86SQ3	457 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	EIF4E3	Q8N5X7	224 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	OR4K15	Q8NH41	348 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	RAB3C	Q96E17	227 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	NEU1	Q99519	415 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	GDF2	Q9UK05	429 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	TNFSF18	Q9UNG2	199 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312		A0A0A6YYH2	397 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312		A6NJ64	397 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	BCL2L11	O43521	198 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF217	O75362	1048 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	AHSA1	O95433	338 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	SLC34A2	O95436	690 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	IL33	O95760	270 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	SNRNP70	P08621	437 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	RPA2	P15927	270 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	RAB6A	P20340	208 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	DDT	P30046	118 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	BID	P55957	195 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	RPS27A	P62979	156 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	UBA52	P62987	128 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	UNC119	Q13432	240 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	C1orf140	Q5VVS0	124 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	DRAM2	Q6UX65	266 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	OR4K17	Q8NGC6	315 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	DYRK2	Q92630	601 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	MRGPRF	Q96AM1	343 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	C8orf44	Q96CB5	159 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	REEP6	Q96HR9	211 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	GPHA2	Q96T91	129 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	PHB2	Q99623	299 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	FN3KRP	Q9HA64	309 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	SEBOX	Q9HB31	216 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	RCL1	Q9Y2P8	373 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	TMEM14A	Q9Y6G1	99 aa		11.16	□□□□□ -0.62
DDR1-238	ENST00000446312	MASP2	O00187	686 aa		11.15	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF749	O43361	778 aa		11.15	□□□□□ -0.62
DDR1-238	ENST00000446312	ZNF735	P0CB33	412 aa		11.15	□□□□□ -0.62
DDR1-238	ENST00000446312	GABRG2	P18507	467 aa		11.15	□□□□□ -0.62
DDR1-238	ENST00000446312	FHIT	P49789	147 aa		11.15	□□□□□ -0.62

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