RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PDLIM3Q53GG5 364 aaPredicted RBP7.12□□□□□ -1.27
SMG1-202ENST00000446231 TMEM268Q5VZI3 342 aa7.12□□□□□ -1.27
SMG1-202ENST00000446231 NXPE3Q969Y0 559 aa7.12□□□□□ -1.27
SMG1-202ENST00000446231 NKX2-4Q9H2Z4 354 aa7.12□□□□□ -1.27
SMG1-202ENST00000446231 ZNF737O75373 536 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 DUXBA0A1W2PPF3 345 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 CST7O76096 145 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ARL3P36405 182 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 THBS3P49746 956 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 GABREP78334 506 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 DIO2Q92813 273 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 SLC46A1Q96NT5 459 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ZNF552Q9H707 407 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 NEU3Q9UQ49 428 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 F6UZH7 168 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ANGPTL7O43827 346 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 THBS2P35442 1172 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 MYEOVQ96EZ4 313 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 MS4A4AQ96JQ5 239 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 NUDT9Q9BW91 350 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 PRSS50Q9UI38 385 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 NAGKQ9UJ70 344 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 COL2A1P02458 1487 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 MIA3Q5JRA6 1907 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 PLEKHA3Q9HB20 300 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 SOD2P04179 222 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 SLC35E2P0CK97 266 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 HOXB9P17482 250 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 NDUFB7P17568 137 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 KHDC3LQ587J8 217 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 RAB24Q969Q5 203 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 SDF2Q99470 211 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 HINT2Q9BX68 163 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 HNRNPA2B1P22626 353 aaKnown RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 TMEM176BQ3YBM2 270 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 RTN4IP1Q8WWV3 396 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 MMABQ96EY8 250 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 STARD5Q9NSY2 213 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 C17orf105B2RV13 164 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ABHD16AO95870 558 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 LIMS1P48059 325 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 TMEFF1Q8IYR6 380 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ZNF683Q8IZ20 524 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ARSGQ96EG1 525 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 B9D1Q9UPM9 204 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 KCNAB1Q14722 419 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ARRDC1Q8N5I2 433 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 FIGNL2A6NMB9 653 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 CDC42EP2O14613 210 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 UBE3DQ7Z6J8 389 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 MARCH3Q86UD3 253 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ATG101Q9BSB4 218 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 SIGLEC7Q9Y286 467 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 TRGC2P03986 189 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 FPR2P25090 351 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 P2RY4P51582 365 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 THSD4Q6ZMP0 1018 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 DCXRQ7Z4W1 244 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 OR51F2Q8NH61 342 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 HSD17B8Q92506 261 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 PRRG4Q9BZD6 226 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 J3QR89 54 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 OR5H8P0DN80 308 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 OR4D11Q8NGI4 311 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ADAMTS18Q8TE60 1221 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 NTNG2Q96CW9 530 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 SLC26A1Q9H2B4 701 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 TMIGD3P0DMS9 266 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 SLC2A1P11166 492 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 BIDP55957 195 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 NSDHLQ15738 373 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 TMPRSS11FQ6ZWK6 438 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ZNF765Q7L2R6 523 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 TSSK2Q96PF2 358 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 SLC5A6Q9Y289 635 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 APBB3O95704 486 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 MT-ATP6P00846 226 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 ZP2Q05996 745 aa7.11□□□□□ -1.27
SMG1-202ENST00000446231 INSM2Q96T92 566 aaPredicted RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 RCL1Q9Y2P8 373 aaKnown RBP7.11□□□□□ -1.27
SMG1-202ENST00000446231 APOA2P02652 100 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 GAPDHP04406 335 aaKnown RBP7.1□□□□□ -1.27
SMG1-202ENST00000446231 RPL18Q07020 188 aaKnown RBP7.1□□□□□ -1.27
SMG1-202ENST00000446231 GAMTQ14353 236 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 PHF19Q5T6S3 580 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 LOC390937A0A1W2PQ73 354 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 TP53I11O14683 189 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 CHRNA7P36544 502 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 CYB561D1Q8N8Q1 229 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 SETD2Q9BYW2 2564 aaPredicted RBP7.1□□□□□ -1.27
SMG1-202ENST00000446231 A0A0B4J2E0 115 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 A0A1B0GX12 115 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 IGFBP6P24592 240 aaPredicted RBP7.1□□□□□ -1.27
SMG1-202ENST00000446231 ZNF100Q8IYN0 542 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 OR9A4Q8NGU2 314 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 UCK1Q9HA47 277 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 PPP1R14DQ9NXH3 145 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 FKBP1BP68106 108 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 TMEM151BQ8IW70 566 aa7.1□□□□□ -1.27
SMG1-202ENST00000446231 GPR137CQ8N3F9 429 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms