RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MAP3K5Q99683 1374 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 THSD7BQ9C0I4 1608 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 MBD5Q9P267 1494 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 UBR1Q8IWV7 1749 aa3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P48-201ENST00000446155 ARHGAP31Q2M1Z3 1444 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 ADGRL3Q9HAR2 1447 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 A0A0B4J2E0 115 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 F8VZ95 297 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 TNRC18O15417 2968 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 CRTAPO75718 401 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 THY1P04216 161 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 GLAP06280 429 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 EIF4EP06730 217 aaKnown RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 GP1BAP07359 652 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 KRTAP1-4P0C5Y4 121 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 RD3LP0DJH9 198 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 CD37P11049 281 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 GNRHRP30968 328 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 KDELR2P33947 212 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 RGS19P49795 217 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 NCBP2P52298 156 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 TSPAN5P62079 268 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 REG3AQ06141 175 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 PRPSAP1Q14558 356 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 QPRTQ15274 297 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 NSDHLQ15738 373 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 SGCAQ16586 387 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 MARC1Q5VT66 337 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 PTRHD1Q6GMV3 140 aaKnown RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 PAMR1Q6UXH9 720 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 TEX43Q6ZNM6 134 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 AHSA2Q719I0 299 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 TMEM179BQ7Z7N9 219 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 CRLF3Q8IUI8 442 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR10W1Q8NGF6 305 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR10G9Q8NGN4 311 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR2Y1Q8NGV0 311 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 FAM151AQ8WW52 585 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 TMEM234Q8WY98 164 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 RNF145Q96MT1 663 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 ZNF396Q96N95 335 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 ZNF251Q9BRH9 671 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 C7orf50Q9BRJ6 194 aaKnown RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 OSBPL11Q9BXB4 747 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR11A1Q9GZK7 315 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 RHBDL2Q9NX52 303 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 RBAKQ9NYW8 714 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 PPIL1Q9Y3C6 166 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 NEUROG3Q9Y4Z2 214 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 MTUS2Q5JR59 1369 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 SPHKAPQ2M3C7 1700 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 C1orf167Q5SNV9 1468 aa3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 ZNF646O15015 1829 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P48-201ENST00000446155 ADGBQ8N7X0 1667 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 USP42Q9H9J4 1324 aaKnown RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 TNS2Q63HR2 1409 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 SHANK3Q9BYB0 1731 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 A0A0G2JN53 185 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 A0A0J9YXY3 114 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 A0A1B0GTI1 187 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 TMEM213A2RRL7 107 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 FABP12A6NFH5 140 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 RSPH10B2B2RC85 870 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 E7ENQ6 273 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PLPP3O14495 311 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 SGCEO43556 437 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ENSAO43768 121 aaKnown RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 RDH16O75452 317 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 TNFAIP8O95379 198 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PTTG1O95997 202 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ACTL6AO96019 429 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 RSPH10BP0C881 870 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 OCMP0CE72 109 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 LIPCP11150 499 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PSMB1P20618 241 aaKnown RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 LOXP28300 417 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 CEACAM3P40198 252 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PPICP45877 212 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 NOVP48745 357 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 HCAR3P49019 387 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 MEOX2P50222 304 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 MLF1P58340 268 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR2B8PP59922 312 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 MYL6P60660 151 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PRPS1P60891 318 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 RPL18AQ02543 176 aaKnown RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 TPBGQ13641 420 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 ZNF266Q14584 549 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PON3Q15166 354 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 COA6Q5JTJ3 125 aaKnown RBP3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 OR2T5Q6IEZ7 315 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 FRMPD2BQ6IN97 320 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 PLEKHG7Q6ZR37 379 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 TMEM25Q86YD3 366 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 RAB43Q86YS6 212 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 BOD1L2Q8IYS8 172 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 DAW1Q8N136 415 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 CA13Q8N1Q1 262 aa3.2□□□□□ -1.9
HMGB1P48-201ENST00000446155 NPWQ8N729 165 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms