RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 TRIM16LQ309B1 348 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 TP53I3Q53FA7 332 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 WDR38Q5JTN6 314 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 BCL2L15Q5TBC7 163 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 C9orf135Q5VTT2 229 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 KCTD8Q6ZWB6 473 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 OR8B12Q8NGG6 310 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 IGFBPL1Q8WX77 278 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 C12orf43Q96C57 262 aaKnown RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 HAVCR1Q96D42 359 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 MARS2Q96GW9 593 aaKnown RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 FOXN4Q96NZ1 517 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 MED18Q9BUE0 208 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 ISG20L2Q9H9L3 353 aaKnown RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 CYSLTR2Q9NS75 346 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 FRRS1LQ9P0K9 344 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 GNG8Q9UK08 70 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 IKZF2Q9UKS7 526 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 ZNF281Q9Y2X9 895 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 RNF115Q9Y4L5 304 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 ZFYVE26Q68DK2 2539 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 TRDV1A0A1B0GX56 115 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 TRIM64BA6NI03 449 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 KALRNO60229 2985 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 PTBP3O95758 552 aaKnown RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 PNPP00491 289 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 LALBAP00709 142 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 CST4P01036 141 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 IGHV3-13P01766 116 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 MAPK3P27361 379 aaPredicted RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 CALCRP30988 508 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 TGFBR2P37173 567 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 IDH3GP51553 393 aaPredicted RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 UCP2P55851 309 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 MFGE8Q08431 387 aaPredicted RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 TSC22D1Q15714 1073 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 TIMM50Q3ZCQ8 353 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 OR2G6Q5TZ20 316 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 C22orf34Q6ZV56 151 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 MYPOPQ86VE0 399 aaPredicted RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 PHC2Q8IXK0 858 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 ZNF283Q8N7M2 679 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 CSNK2A3Q8NEV1 391 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 ISOC1Q96CN7 298 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 OR5M11Q96RB7 305 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 UQCC2Q9BRT2 126 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 COMMD4Q9H0A8 199 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 IFT22Q9H7X7 185 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 NEK6Q9HC98 313 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 BOD1L1Q8NFC6 3051 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 TRBV23-1A0A0A0MS06 115 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 A0A1W2PPW3 197 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 J3QLW9 94 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 DHRS3O75911 302 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 APOL3O95236 402 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 CD3EP07766 207 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 RNF224P0DH78 156 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 ZNF19P17023 458 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 THBS4P35443 961 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 RPS27P42677 84 aaKnown RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 CDH15P55291 814 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 NANOS3P60323 173 aaKnown RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 RPS11P62280 158 aaKnown RBP eCLIP7.55□□□□□ -1.2
FXR1-203ENST00000445140 MALLQ13021 153 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 DOC2BQ14184 412 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 TIGD6Q17RP2 521 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 PXDC1Q5TGL8 231 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 DTX2Q86UW9 622 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 PARP16Q8N5Y8 322 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 NKIRAS2Q9NYR9 191 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 MRPL15Q9P015 296 aaKnown RBP7.55□□□□□ -1.2
FXR1-203ENST00000445140 DAPK2Q9UIK4 370 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 HHLA2Q9UM44 414 aa7.55□□□□□ -1.2
FXR1-203ENST00000445140 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.54□□□□□ -1.2
FXR1-203ENST00000445140 C5orf49A4QMS7 147 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 A6NNC1 897 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 RGS13O14921 159 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 SIAH2O43255 324 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 CLDN1O95832 211 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 CD55P08174 381 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 CELA3BP08861 270 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 PPP1CBP62140 327 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 SSX1Q16384 188 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 OR14K1Q8NGZ2 314 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 ZNF420Q8TAQ5 688 aaPredicted RBP7.54□□□□□ -1.2
FXR1-203ENST00000445140 TMEM171Q8WVE6 324 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 ZNF486Q96H40 463 aaPredicted RBP7.54□□□□□ -1.2
FXR1-203ENST00000445140 DIRC2Q96SL1 478 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 CENPMQ9NSP4 180 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 CRIM1Q9NZV1 1036 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 FOXJ3Q9UPW0 622 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 E9PI62 339 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 C19orf84I3L1E1 186 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 CASKO14936 926 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 FSTL3O95633 263 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 ALDOBP05062 364 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 LCKP06239 509 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 PATE4P0C8F1 98 aa7.54□□□□□ -1.2
FXR1-203ENST00000445140 MAP2K4P45985 399 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms