RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TRIM25Q14258 630 aaKnown RBP6.49□□□□□ -1.37
CD44-211ENST00000442151 PCK2Q16822 640 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 MICBQ29980 383 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 RSPO1Q2MKA7 263 aaPredicted RBP6.49□□□□□ -1.37
CD44-211ENST00000442151 SPRNQ5BIV9 151 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 CD300LDQ6UXZ3 194 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 DCXRQ7Z4W1 244 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 AQP11Q8NBQ7 271 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 SLC37A3Q8NCC5 494 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 OR4F5Q8NH21 305 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 C22orf15Q8WYQ4 148 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 SAMHD1Q9Y3Z3 626 aaKnown RBP6.49□□□□□ -1.37
CD44-211ENST00000442151 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 MMP24Q9Y5R2 645 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 LYVE1Q9Y5Y7 322 aa6.49□□□□□ -1.37
CD44-211ENST00000442151 BTBD17A6NE02 478 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 ARRDC5A6NEK1 342 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 DNAJC9-AS1A6NH13 148 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 ACOD1A6NK06 481 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 TMEM210A6NLX4 147 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 SRRM5B3KS81 715 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 TBX1O43435 398 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 GPANK1O95872 356 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PLATP00750 562 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 HLA-DPB1P04440 258 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 ANXA2P07355 339 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 GRPP07492 148 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 H2BFMP0C1H6 154 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 RAP2AP10114 183 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 CALB2P22676 271 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 GSTT1P30711 240 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PSMB10P40306 273 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 MAGEA2P43356 314 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PRKXP51817 358 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 ZNF92Q03936 586 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 MAB21L1Q13394 359 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 BLMHQ13867 455 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 EIF2B1Q14232 305 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 KLF17Q5JT82 389 aaPredicted RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 LCN8Q6JVE9 175 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 DPY19L4Q7Z388 723 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 FITM2Q8N6M3 262 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 BOLLQ8N9W6 283 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 OR10S1Q8NGN2 331 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 OR6K6Q8NGW6 343 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 GIPC3Q8TF64 312 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 DNAJC9Q8WXX5 260 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 LRTOMTQ8WZ04 291 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 C12orf43Q96C57 262 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 MED30Q96HR3 178 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PGAM5Q96HS1 289 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 MAP6Q96JE9 813 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 INTS14Q96SY0 518 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 DDOQ99489 341 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 DNTTIP1Q9H147 329 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 DPAGT1Q9H3H5 408 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PRDM13Q9H4Q3 707 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 EGLN3Q9H6Z9 239 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 CNTD2Q9H8S5 307 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 WDR76Q9H967 626 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PNRC2Q9NPJ4 139 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 CMC2Q9NRP2 79 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 UFSP2Q9NUQ7 469 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 ARL8BQ9NVJ2 186 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 MRPL22Q9NWU5 206 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 C1orf123Q9NWV4 160 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 DCAF16Q9NXF7 216 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 KAAG1Q9UBP8 84 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 N6AMT1Q9Y5N5 214 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 MPC1Q9Y5U8 109 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 TVP23AA6NH52 213 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PRR23D1E9PI22 279 aaPredicted RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 H3BN98 237 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 NDUFB3O43676 98 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 E2F6O75461 281 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 GLCEO94923 617 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PRR23D2P0DMB1 279 aaPredicted RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 ATP6V1B1P15313 513 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 SPI1P17947 270 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 EEF1B2P24534 225 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 MSX2P35548 267 aaPredicted RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 PMELP40967 661 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 ERFP50548 548 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 FGF12P61328 243 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 SEC61A1P61619 476 aaKnown RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 PAX2Q02962 417 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 SLC9A3R2Q15599 337 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 LRRC10Q5BKY1 277 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 SLC35D3Q5M8T2 416 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 PRR31Q5SQ13 230 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 GLYATL3Q5SZD4 288 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 KCTD18Q6PI47 426 aaPredicted RBP6.48□□□□□ -1.37
CD44-211ENST00000442151 GDPGP1Q6ZNW5 385 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 C17orf107Q6ZR85 190 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 NAA40Q86UY6 237 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 OR10Z1Q8NGY1 313 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 SPSB4Q96A44 273 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 REEP6Q96HR9 211 aa6.48□□□□□ -1.37
CD44-211ENST00000442151 RTL8AQ9BWD3 113 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms