RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 UNC119Q13432 240 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 ZMYND11Q15326 602 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 RBMS2Q15434 407 aaKnown RBP11.5□□□□□ -0.57
CPSF4-206ENST00000441580 C3AR1Q16581 482 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 RSPO1Q2MKA7 263 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-206ENST00000441580 DEFB109BQ30KR1 87 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 SNAI3Q3KNW1 292 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 PABPC1L2AQ5JQF8 200 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 MTFR2Q6P444 385 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 GLIPR1L1Q6UWM5 242 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 P4HA3Q7Z4N8 544 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 BIVMQ86UB2 503 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 TMEM229BQ8NBD8 167 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 AQP3Q92482 292 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 ST6GAL2Q96JF0 529 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 SOX7Q9BT81 388 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 URM1Q9BTM9 101 aaKnown RBP11.5□□□□□ -0.57
CPSF4-206ENST00000441580 TMEM59Q9BXS4 323 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 DEFB127Q9H1M4 99 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 OPA3Q9H6K4 179 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 MCUBQ9NWR8 336 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 KLK11Q9UBX7 282 aa11.5□□□□□ -0.57
CPSF4-206ENST00000441580 NCOA6Q14686 2063 aaPredicted RBP11.5□□□□□ -0.57
CPSF4-206ENST00000441580 TRAV6A0A075B6T7 132 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 hCG_38984A0A1B0GV85 526 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 E9PLN8 166 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 SS18L1O75177 396 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-206ENST00000441580 NDUFB6O95139 128 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 GTF2F2P13984 249 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 ANOS1P23352 680 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 OR3A4PP47883 348 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 CCR6P51684 374 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 PMP22Q01453 160 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 HGFACQ04756 655 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 ARL6IP1Q15041 203 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 RNFT1Q5M7Z0 435 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 CD276Q5ZPR3 534 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 ANGPTL5Q86XS5 388 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 ZADH2Q8N4Q0 377 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 ACBD4Q8NC06 268 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 OR56B1Q8NGI3 324 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 GIMAP1Q8WWP7 306 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 SARAFQ96BY9 339 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 NKX3-1Q99801 234 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-206ENST00000441580 C1QTNF5Q9BXJ0 243 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 MED28Q9H204 178 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF224Q9NZL3 707 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 CLCF1Q9UBD9 225 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 KCNMB2Q9Y691 235 aa11.49□□□□□ -0.57
CPSF4-206ENST00000441580 IGKV1-9A0A0C4DH69 117 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 RAB27BO00194 218 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 CDC14BO60729 498 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 CYB5AP00167 134 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 IGHV3-9P01782 118 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 SERPINA5P05154 406 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 GSTP1P09211 210 aaKnown RBP11.48□□□□□ -0.57
CPSF4-206ENST00000441580 PTHLHP12272 177 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 TBPP20226 339 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 MPGP29372 298 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 OR3A2P47893 321 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 MECP2P51608 486 aaKnown RBP11.48□□□□□ -0.57
CPSF4-206ENST00000441580 GUCA2AQ02747 115 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 MAB21L1Q13394 359 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 MEF2DQ14814 521 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 OR8B8Q15620 311 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 KISS1Q15726 138 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 CLVS2Q5SYC1 327 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 METTL11BQ5VVY1 283 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 Q6ZTK2 550 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 LHFPL2Q6ZUX7 228 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 ZBTB8BQ8NAP8 495 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-206ENST00000441580 STEAP2Q8NFT2 490 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 OR4C16Q8NGL9 310 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 OR10R2Q8NGX6 335 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 SGK3Q96BR1 496 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 C1orf147Q96MC9 270 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-206ENST00000441580 S100A13Q99584 98 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 OR51J1Q9H342 316 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 MRPL15Q9P015 296 aaKnown RBP11.48□□□□□ -0.57
CPSF4-206ENST00000441580 CSAG2Q9Y5P2 127 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 MUC3AQ02505 3323 aa11.48□□□□□ -0.57
CPSF4-206ENST00000441580 A0A0A6YYJ9 748 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF816-ZNF321PA0A0X1KG74 233 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 C5orf63A6NC05 138 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 TMEM235A6NFC5 223 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 GMDSO60547 372 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 MPIG6BO95866 241 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 TGM6O95932 706 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 MELTFP08582 738 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 PLP2Q04941 152 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 FAPQ12884 760 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF169Q14929 603 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-206ENST00000441580 PNLIPRP3Q17RR3 467 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 GSG1Q2KHT4 349 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 ZNF260Q3ZCT1 412 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 FBXW9Q5XUX1 488 aa11.47□□□□□ -0.57
CPSF4-206ENST00000441580 TMEM42Q69YG0 159 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms