RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TNFSF11O14788 317 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 SMAD9O15198 467 aaKnown RBP12.53□□□□□ -0.4
LIMD1-202ENST00000440097 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
LIMD1-202ENST00000440097 PGA4P0DJD7 388 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 PGA3P0DJD8 388 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 GTF2F2P13984 249 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 LAP3P28838 519 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 CYB561P49447 251 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 MEOX2P50222 304 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 MFAP5Q13361 173 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 BEX5Q5H9J7 111 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 TEX30Q5JUR7 227 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 LY6G6FQ5SQ64 297 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 OR2AJ1Q8NGZ0 328 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 CDC6Q99741 560 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 PIGQQ9BRB3 760 aa12.53□□□□□ -0.4
LIMD1-202ENST00000440097 PHF3Q92576 2039 aaKnown RBP12.53□□□□□ -0.4
LIMD1-202ENST00000440097 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 A0A1W2PNU3 283 aaPredicted RBP12.52□□□□□ -0.4
LIMD1-202ENST00000440097 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 ZIC3O60481 467 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 TNFSF15O95150 251 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 SERPINA7P05543 415 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 QDPRP09417 244 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 CSF1P09603 554 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF806P0C7X5 589 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 PVALBP20472 110 aaPredicted RBP12.52□□□□□ -0.4
LIMD1-202ENST00000440097 CD96P40200 585 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 GUCA1AP43080 201 aaPredicted RBP12.52□□□□□ -0.4
LIMD1-202ENST00000440097 P2RY4P51582 365 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 TAF13Q15543 124 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 JMJD6Q6NYC1 403 aaPredicted RBP12.52□□□□□ -0.4
LIMD1-202ENST00000440097 OR13C3Q8NGS6 347 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 OR8S1Q8NH09 359 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 ST7LQ8TDW4 575 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 DVL3Q92997 716 aaPredicted RBP12.52□□□□□ -0.4
LIMD1-202ENST00000440097 WNT2BQ93097 391 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.4
LIMD1-202ENST00000440097 SLAMF6Q96DU3 332 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 UCN2Q96RP3 112 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 MRPL13Q9BYD1 178 aaKnown RBP12.52□□□□□ -0.4
LIMD1-202ENST00000440097 ETV7Q9Y603 341 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 R4GMQ9 66 aa12.52□□□□□ -0.4
LIMD1-202ENST00000440097 A0A0D9SG52 128 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 PPIAP62937 165 aaKnown RBP12.52□□□□□ -0.41
LIMD1-202ENST00000440097 ZNF227Q86WZ6 799 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 ADPRHL1Q8NDY3 354 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 MCHR2Q969V1 340 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 MRI1Q9BV20 369 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 C1orf198Q9H425 327 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 POFUT1Q9H488 388 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 OR52A1Q9UKL2 312 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 SPTBN4Q9H254 2564 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 PCNX2A6NKB5 2137 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 DMXL2Q8TDJ6 3036 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 XRCC3O43542 346 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 APOC1P02654 83 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 COMMD2Q86X83 199 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 CATSPERDQ86XM0 798 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 CCDC36Q8IYA8 594 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 OR1S2Q8NGQ3 325 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 OR6X1Q8NH79 312 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 ZNF471Q9BX82 626 aaPredicted RBP12.52□□□□□ -0.41
LIMD1-202ENST00000440097 PIGMQ9H3S5 423 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 ASH2LQ9UBL3 628 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 PCDHB10Q9UN67 800 aa12.52□□□□□ -0.41
LIMD1-202ENST00000440097 PQLC2LA1A4F0 135 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 CD3DP04234 171 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 AKAIN1P0CW23 69 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 ITGA3P26006 1051 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 HSD11B1P28845 292 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 CSNK2A1P68400 391 aaPredicted RBP12.51□□□□□ -0.41
LIMD1-202ENST00000440097 SPINK14Q6IE38 97 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 FDX2Q6P4F2 183 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 LRRTM1Q86UE6 522 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 LURAP1LQ8IV03 231 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 SVBPQ8N300 66 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 IL22RA1Q8N6P7 574 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 LINC00469Q8N7U9 141 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 THRSPQ92748 146 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
LIMD1-202ENST00000440097 SH2D2AQ9NP31 389 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 LRFN1Q9P244 771 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 HHLA2Q9UM44 414 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 LOC107986453A0A1B0GWG9 222 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 EIF1BO60739 113 aaKnown RBP12.51□□□□□ -0.41
LIMD1-202ENST00000440097 PMS2P2O95744 297 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 BDKRB2P30411 391 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 AGTR1P30556 359 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 EFNB2P52799 333 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 SGCAQ16586 387 aa12.51□□□□□ -0.41
LIMD1-202ENST00000440097 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
LIMD1-202ENST00000440097 STEAP2Q8NFT2 490 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms