RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 OR4K15Q8NH41 348 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 NUBPLQ8TB37 319 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 STT3BQ8TCJ2 826 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 MARCH1Q8TCQ1 289 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 NAT6Q93015 286 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 R4GN57 208 aa14.51□□□□□ -0.09
CLCNKA-203ENST00000439316 WDFY3Q8IZQ1 3526 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF318Q5VUA4 2279 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 RAB19A4D1S5 217 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF878C9JN71 531 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 H3BML4 177 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 FGF16O43320 207 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 SERPINF1P36955 418 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 DEFA5Q01523 94 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 SLC25A53Q5H9E4 307 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 VAX1Q5SQQ9 334 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 ANKRD37Q7Z713 158 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 CLRN3Q8NCR9 226 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 NOXO1Q8NFA2 376 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 OR5AP2Q8NGF4 316 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 IFI44Q8TCB0 444 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 ELP5Q8TE02 316 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 MARC2Q969Z3 335 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 PIK3IP1Q96FE7 263 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 MESP1Q9BRJ9 268 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 NMES1Q9C002 83 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 CHMP1AQ9HD42 196 aaPredicted RBP14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 PCDHB10Q9UN67 800 aa14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 MRPS28Q9Y2Q9 187 aaKnown RBP14.5□□□□□ -0.09
CLCNKA-203ENST00000439316 TEX13DA0A0J9YY54 714 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 FAM74A7A6NL05 159 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 CEACAM18A8MTB9 384 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 CX3CR1P49238 355 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF169Q14929 603 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 MICBQ29980 383 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 FAM74A3Q4VXF1 159 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 ACTBL2Q562R1 376 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 PLAC9Q5JTB6 97 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 GLIPR1L1Q6UWM5 242 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF101Q8IZC7 436 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 ADPRHL1Q8NDY3 354 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 OR4K17Q8NGC6 315 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 OR1S2Q8NGQ3 325 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 THAP3Q8WTV1 239 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 MRGPRX4Q96LA9 322 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 NKX6-2Q9C056 277 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 CSAG2Q9Y5P2 127 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 CFAP54Q96N23 3096 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 IGLV3-12A0A075B6K2 115 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 C5orf51A6NDU8 294 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 TOX3O15405 576 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 CDC14BO60729 498 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 PGA4P0DJD7 388 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 PGA3P0DJD8 388 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 ICAM2P13598 275 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 PGAM2P15259 253 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 HIST1H1DP16402 221 aaKnown RBP14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 MYBPHQ13203 477 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 NAA40Q86UY6 237 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM104Q8NE00 496 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 OR8B12Q8NGG6 310 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 TERB2Q8NHR7 220 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 CDC6Q99741 560 aa14.49□□□□□ -0.09
CLCNKA-203ENST00000439316 ABCD4O14678 606 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 ABOP16442 354 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 P2RY4P51582 365 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 CLRN1P58418 232 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 CYCSP99999 105 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 PNLIPRP3Q17RR3 467 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 PLPPR5Q32ZL2 321 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM128Q5BJH2 165 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 UEVLDQ8IX04 471 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 ARRDC1Q8N5I2 433 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 KCNG3Q8TAE7 436 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 POC1BQ8TC44 478 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 TMEM230Q96A57 120 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 RAB3CQ96E17 227 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 SPACA5Q96QH8 159 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 RNF126Q9BV68 326 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 SLC6A15Q9H2J7 730 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 ASF1BQ9NVP2 202 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 GPR132Q9UNW8 380 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 SRPK3Q9UPE1 567 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 POLR1DQ9Y2S0 133 aa14.48□□□□□ -0.09
CLCNKA-203ENST00000439316 IGLV3-32A0A0A0MS00 114 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 IGHV5-10-1A0A0J9YXX1 117 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 C13orf42A0A1B0GVH6 325 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 SOCS1O15524 211 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 ATG12O94817 140 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 MPIG6BO95866 241 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 IGHG1P01857 330 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 CCL1P22362 96 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 IL32P24001 234 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 MSX1P28360 303 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 OR3A4PP47883 348 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 ZNF41P51814 821 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 NAAAQ02083 359 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 PABPC1L2AQ5JQF8 200 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 PDSS1Q5T2R2 415 aa14.47□□□□□ -0.09
CLCNKA-203ENST00000439316 RHBDD2Q6NTF9 364 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms