RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 FLVCR2Q9UPI3 526 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 MRPS18CQ9Y3D5 142 aaKnown RBP6.57□□□□□ -1.36
COL17A1-204ENST00000433822 FLVCR1Q9Y5Y0 555 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 LHFPL6Q9Y693 200 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF462Q96JM2 2506 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 SPTA1P02549 2419 aa6.57□□□□□ -1.36
COL17A1-204ENST00000433822 PTPN13Q12923 2485 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 IGKV1D-43A0A0B4J1Z2 117 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 A0A1B0GTI1 187 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM82A0PJX8 343 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 GJE1A6NN92 205 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 C17orf51A8MQB3 221 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 LEUTXA8MZ59 168 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF736B4DX44 427 aaPredicted RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 F5H5P2 479 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 EIF1AYO14602 144 aaKnown RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 OR2J2O76002 312 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 MPZL1O95297 269 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 CD3DP04234 171 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF735P0CB33 412 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF883P0CG24 379 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 VSIG10L2P0DP72 767 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 PRF1P14222 555 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF43P17038 809 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ANXA7P20073 488 aaKnown RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 IL11P20809 199 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 CBX5P45973 191 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 DHPSP49366 369 aaPredicted RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 P2RX3P56373 397 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 CLDN6P56747 220 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 RAB14P61106 215 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 SNRPD2P62316 118 aaKnown RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 CSNK2A1P68400 391 aaPredicted RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 GABREP78334 506 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 FMODQ06828 376 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 PLA2G7Q13093 441 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 CHAF1BQ13112 559 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 BAMBIQ13145 260 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF345Q14585 488 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 OPCMLQ14982 345 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 HLA-BQ31612 363 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 UTS2BQ765I0 119 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 LSRQ86X29 649 aaPredicted RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF584Q8IVC4 421 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 WDSUB1Q8N9V3 476 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 OR10G3Q8NGC4 313 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 OR4K17Q8NGC6 315 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 OR51S1Q8NGJ8 323 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 OR2Y1Q8NGV0 311 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM54Q969K7 222 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 SGCZQ96LD1 299 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 NPAS1Q99742 590 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 SEC22CQ9BRL7 303 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 NAA11Q9BSU3 229 aaPredicted RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 PNRC2Q9NPJ4 139 aaKnown RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 C19orf73Q9NVV2 129 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 MED29Q9NX70 200 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 MRPL15Q9P015 296 aaKnown RBP6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF69Q9UC07 566 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF391Q9UJN7 358 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 GTF2A1LQ9UNN4 478 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 VDAC3Q9Y277 283 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 ACACAQ13085 2346 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 KALRNO60229 2985 aa6.56□□□□□ -1.36
COL17A1-204ENST00000433822 A0A0B4J2A0 478 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 OR14I1A6ND48 311 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 A6NL46 340 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 RFPL4AA6NLU0 287 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF726A6NNF4 738 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 RFPL4AL1F8VTS6 287 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 H3BML4 177 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 L7N2F9 121 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 GMFGO60234 142 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 MPC2O95563 127 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 OR4E1P0C645 316 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 RRASP10301 218 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 COX6A1P12074 109 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 SLC25A4P12235 298 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 ICAM2P13598 275 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 LIFP15018 202 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 PPP3CBP16298 524 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 S100A11P31949 105 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 THBS4P35443 961 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 SSR4P51571 173 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 TAS2R31P59538 309 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 SEC61A1P61619 476 aaKnown RBP6.55□□□□□ -1.36
COL17A1-204ENST00000433822 ECH1Q13011 328 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 EXOSC2Q13868 293 aaKnown RBP6.55□□□□□ -1.36
COL17A1-204ENST00000433822 STK11Q15831 433 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 RNASE10Q5GAN6 216 aaKnown RBP6.55□□□□□ -1.36
COL17A1-204ENST00000433822 NHLRC3Q5JS37 347 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 VAX1Q5SQQ9 334 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 FAM69BQ5VUD6 431 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 MTFR2Q6P444 385 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 TSSK4Q6SA08 328 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 C3P1Q6ZMU1 363 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 SHISA6Q6ZSJ9 500 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 MDGA2Q7Z553 956 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 NAA40Q86UY6 237 aa6.55□□□□□ -1.36
COL17A1-204ENST00000433822 SLC25A42Q86VD7 318 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms