RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 ZNF121P58317 390 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 ECH1Q13011 328 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 STK11Q15831 433 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 PLEKHN1Q494U1 663 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 CCDC157Q569K6 752 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 C10orf128Q5T292 105 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 C16orf47Q6ZP98 133 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 ABHD12BQ7Z5M8 362 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 MARC2Q969Z3 335 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 SPACA9Q96E40 222 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 SHDQ96IW2 340 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 FAM117AQ9C073 453 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 GPR84Q9NQS5 396 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 A0A0A6YYD4 124 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 ZNF43P17038 809 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-207ENST00000433762 MICBQ29980 383 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 OR14K1Q8NGZ2 314 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 FN3KRPQ9HA64 309 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 MBD2Q9UBB5 411 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 DNAJB11Q9UBS4 358 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 ASXL3Q9C0F0 2248 aa12.07□□□□□ -0.48
COL6A3-207ENST00000433762 C2orf72A6NCS6 295 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 FOXI3A8MTJ6 420 aaPredicted RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 LGALS8O00214 317 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 CCSO14618 274 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 TP53I11O14683 189 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 TSPAN4O14817 238 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SCRG1O75711 98 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 PET100P0DJ07 73 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 NAT2P11245 290 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 ZNF17P17021 662 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 VAMP1P23763 118 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SLC6A9P48067 706 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 PLAC9Q5JTB6 97 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 DRAM2Q6UX65 266 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SHISA6Q6ZSJ9 500 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SLC16A14Q7RTX9 510 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 RELL2Q8NC24 303 aaPredicted RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 ADAD2Q8NCV1 583 aaKnown RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 OR5AP2Q8NGF4 316 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 PP6455Q8WZ26 134 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SPSB2Q99619 263 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 TM2D1Q9BX74 207 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SEC61A2Q9H9S3 476 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 ZC4H2Q9NQZ6 224 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 NXT1Q9UKK6 140 aaKnown RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 CA14Q9ULX7 337 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 EYSQ5T1H1 3165 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 FIGNL2A6NMB9 653 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 ZNF726A6NNF4 738 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SERPINE3A8MV23 424 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 F5H0A9 414 aaPredicted RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 TOR1AO14656 332 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 ABCD4O14678 606 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 TPD52L2O43399 206 aaKnown RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 VAMP5O95183 116 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 MPIG6BO95866 241 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 AVPR2P30518 371 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 HIST1H3AP68431 136 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 HIST2H3PS2Q5TEC6 136 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 ZNF574Q6ZN55 896 aaPredicted RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 HIST2H3AQ71DI3 136 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 GTPBP8Q8N3Z3 284 aaPredicted RBP12.06□□□□□ -0.48
COL6A3-207ENST00000433762 OR52H1Q8NGJ2 320 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 OR5H2Q8NGV7 314 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 MARCH1Q8TCQ1 289 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 PMEPA1Q969W9 287 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 TMEM41AQ96HV5 264 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SEC22AQ96IW7 307 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 OR10A2Q9H208 303 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 SLC6A15Q9H2J7 730 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 WDR54Q9H977 334 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 HRH3Q9Y5N1 445 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 V9GYS6 101 aa12.06□□□□□ -0.48
COL6A3-207ENST00000433762 PMP2P02689 132 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 AKR1C4P17516 323 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 SERPINF1P36955 418 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 EIF5AP63241 154 aaKnown RBP12.05□□□□□ -0.48
COL6A3-207ENST00000433762 PRSS54Q6PEW0 395 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 SLC38A9Q8NBW4 561 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 OR10G3Q8NGC4 313 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 INTS12Q96CB8 462 aaKnown RBP12.05□□□□□ -0.48
COL6A3-207ENST00000433762 ZNF75AQ96N20 296 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 NECAB3Q96P71 396 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-207ENST00000433762 OR5B2Q96R09 309 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 NICN1Q9BSH3 213 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 C5orf66Q9H5L9 145 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 COQ3Q9NZJ6 369 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 ASH2LQ9UBL3 628 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 OSGIN2Q9Y236 505 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 FLVCR1Q9Y5Y0 555 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 ARID1BQ8NFD5 2236 aaPredicted RBP12.05□□□□□ -0.48
COL6A3-207ENST00000433762 LOC102723996A0A087X1L8 192 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 DHRS7CA6NNS2 312 aa12.05□□□□□ -0.48
COL6A3-207ENST00000433762 EIF1BO60739 113 aaKnown RBP12.05□□□□□ -0.48
COL6A3-207ENST00000433762 HCKP08631 526 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms