RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 ZNF600Q6ZNG1 722 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 KCTD9Q7L273 389 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 BEST3Q8N1M1 668 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 CCDC107Q8WV48 283 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 SLC25A21Q9BQT8 299 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 EDEM2Q9BV94 578 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 UPB1Q9UBR1 384 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 A0A0J9YW62 118 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 CRTAPO75718 401 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ONECUT2O95948 504 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 RLN2P04090 185 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 KLK3P07288 261 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 CSNK1A1P48729 337 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 HIST3H3Q16695 136 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 IGSF11Q5DX21 431 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 GSG1LQ6UXU4 331 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ANGPTL6Q8NI99 470 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 MARCH1Q8TCQ1 289 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ZBTB8AQ96BR9 441 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 PDCD10Q9BUL8 212 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 DISC1C4P0D8 188 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ZNHIT1O43257 154 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ERCC1P07992 297 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 PATE4P0C8F1 98 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 SLC35A1P78382 337 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 BAMBIQ13145 260 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 RSPO1Q2MKA7 263 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ZNF660Q6AZW8 331 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 YRDCQ86U90 279 aaKnown RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 GTPBP8Q8N3Z3 284 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 PTX4Q96A99 478 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 PGAM5Q96HS1 289 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ARHGAP5-AS1Q96IT6 56 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 SRXN1Q9BYN0 137 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 ALX4Q9H161 411 aaPredicted RBP10.23□□□□□ -0.77
FIRRE-201ENST00000427391 SLCO5A1Q9H2Y9 848 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 HDGFL3Q9Y3E1 203 aa10.23□□□□□ -0.77
FIRRE-201ENST00000427391 NCKAP5O14513 1909 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 A0A0A6YYH2 397 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 A6NJ64 397 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 OR6C65A6NJZ3 312 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 HMSDA8MTL9 139 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 SIGLEC5O15389 551 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 CDC14BO60729 498 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 CD63P08962 238 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 LIFP15018 202 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 NTF4P34130 210 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 CASRP41180 1078 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 CAPZA1P52907 286 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 ATP1B3P54709 279 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 H3F3AP84243 136 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 SIGLEC14Q08ET2 396 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 IKZF1Q13422 519 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 ENDOGQ14249 297 aaKnown RBP10.22□□□□□ -0.77
FIRRE-201ENST00000427391 MICBQ29980 383 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 TRIM61Q5EBN2 209 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 TCEAL6Q6IPX3 200 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 RAB12Q6IQ22 244 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 TMEM65Q6PI78 240 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 CRIP3Q6Q6R5 217 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 ZNF546Q86UE3 836 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 SLC38A6Q8IZM9 456 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 AGBL5Q8NDL9 886 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 ADPRHL1Q8NDY3 354 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 TCEAL3Q969E4 200 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 LINC00052Q96N35 136 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 DKKL1Q9UK85 242 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 LOC102723996A0A087X1L8 192 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 OR5H14A6NHG9 310 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 EEF1E1-BLOC1S5C9J1V9 151 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 CDK2AP1O14519 115 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 ZBTB25P24278 435 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 EIF1P41567 113 aaKnown RBP10.22□□□□□ -0.77
FIRRE-201ENST00000427391 NPY4RP50391 375 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 SIGIRRQ6IA17 410 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 PLXDC2Q6UX71 529 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 RPS19BP1Q86WX3 136 aaKnown RBP10.22□□□□□ -0.77
FIRRE-201ENST00000427391 NAXEQ8NCW5 288 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 OR5M8Q8NGP6 311 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 SLC25A43Q8WUT9 341 aaPredicted RBP10.22□□□□□ -0.77
FIRRE-201ENST00000427391 RBPMSQ93062 196 aaKnown RBP10.22□□□□□ -0.77
FIRRE-201ENST00000427391 PIGTQ969N2 578 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 RAB3CQ96E17 227 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 TMEM59Q9BXS4 323 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 REG4Q9BYZ8 158 aa10.22□□□□□ -0.77
FIRRE-201ENST00000427391 NPIPA2E9PIF3 369 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 NPIPA3F8WFD2 350 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.77
FIRRE-201ENST00000427391 MELTFP08582 738 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 STARP49675 285 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 SSR4P51571 173 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 IL13RA1P78552 427 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 ZIC4Q8N9L1 334 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 OR14K1Q8NGZ2 314 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 OR4K15Q8NH41 348 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 OR2AE1Q8NHA4 323 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 ROBO4Q8WZ75 1007 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 WDR54Q9H977 334 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 SDHAF2Q9NX18 166 aa10.21□□□□□ -0.77
FIRRE-201ENST00000427391 FREM1Q5H8C1 2179 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms