RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 MYBPHQ13203 477 aa11.88□□□□□ -0.51
USP42-203ENST00000426246 TMEM244Q5VVB8 128 aa11.88□□□□□ -0.51
USP42-203ENST00000426246 H3F3CQ6NXT2 135 aa11.88□□□□□ -0.51
USP42-203ENST00000426246 OR1M1Q8NGA1 313 aa11.88□□□□□ -0.51
USP42-203ENST00000426246 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
USP42-203ENST00000426246 ZNF160Q9HCG1 818 aa11.88□□□□□ -0.51
USP42-203ENST00000426246 SPRY1O43609 319 aaPredicted RBP11.87□□□□□ -0.51
USP42-203ENST00000426246 IGLV3-21P80748 117 aaPredicted RBP11.87□□□□□ -0.51
USP42-203ENST00000426246 TGIF1Q15583 401 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 ELFN2Q5R3F8 820 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 SLC36A1Q7Z2H8 476 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 FBXO9Q9UK97 447 aaPredicted RBP11.87□□□□□ -0.51
USP42-203ENST00000426246 CTDSPLO15194 276 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 CSTBP04080 98 aaKnown RBP11.87□□□□□ -0.51
USP42-203ENST00000426246 VSIG8P0DPA2 414 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 RCC1P18754 421 aaPredicted RBP11.87□□□□□ -0.51
USP42-203ENST00000426246 PLEKHN1Q494U1 663 aaPredicted RBP11.87□□□□□ -0.51
USP42-203ENST00000426246 KRBOX4Q5JUW0 171 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 PLXDC1Q8IUK5 500 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 SPICQ8N5J4 248 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 CD300LFQ8TDQ1 290 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 LANCL2Q9NS86 450 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 FAM86C1Q9NVL1 165 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 R4GMQ9 66 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 TRBV5-5A0A0J9YX44 114 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 OR2M5A3KFT3 312 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 MED6O75586 246 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 RPA2P15927 270 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 ANOS1P23352 680 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 EPHA8P29322 1005 aaPredicted RBP11.87□□□□□ -0.51
USP42-203ENST00000426246 IL10RAQ13651 578 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 SPIN3Q5JUX0 258 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 C11orf87Q6NUJ2 197 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 OR5M9Q8NGP3 310 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 OR13C8Q8NGS7 320 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 SAP25Q8TEE9 199 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 EDAQ92838 391 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 ZNF416Q9BWM5 594 aa11.87□□□□□ -0.51
USP42-203ENST00000426246 OR5H15A6NDH6 313 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 OR6C76A6NM76 312 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 KRBOX1C9JBD0 128 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 SCRG1O75711 98 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 ZNF806P0C7X5 589 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 CD80P33681 288 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 RAG2P55895 527 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP42-203ENST00000426246 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 C6orf201Q7Z4U5 140 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 UBALD1Q8TB05 177 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 PHYHIPQ92561 330 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 PRRT1Q99946 306 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 SLC19A3Q9BZV2 496 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 GPR173Q9NS66 373 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 PLEKHJ1Q9NW61 149 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 TRAV14DV4A0A0A6YYC5 116 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 MFSD2BA6NFX1 497 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 CARFQ8N187 725 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 LRRC75AQ8NAA5 344 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 HSD17B11Q8NBQ5 300 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
USP42-203ENST00000426246 NKX6-2Q9C056 277 aaPredicted RBP11.86□□□□□ -0.51
USP42-203ENST00000426246 GAREM1Q9H706 876 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 NXT1Q9UKK6 140 aaKnown RBP11.86□□□□□ -0.51
USP42-203ENST00000426246 FREM1Q5H8C1 2179 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 ZNF318Q5VUA4 2279 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 A0A1B0GTQ1 180 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 FRG2CA6NGY1 282 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 IL5P05113 134 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 UBBP0CG47 229 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 UBCP0CG48 685 aaKnown RBP11.86□□□□□ -0.51
USP42-203ENST00000426246 ZP3P21754 424 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 AGTR1P30556 359 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 ASB17Q8WXJ9 295 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 MR1Q95460 341 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 MCHR2Q969V1 340 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 SERINC1Q9NRX5 453 aa11.86□□□□□ -0.51
USP42-203ENST00000426246 RABL2AQ9UBK7 228 aaPredicted RBP11.86□□□□□ -0.51
USP42-203ENST00000426246 COL5A1P20908 1838 aaPredicted RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 C9orf170A2RU37 121 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 MSGN1A6NI15 193 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 PHYHO14832 338 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 SNRNP70P08621 437 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 WDR74Q6RFH5 385 aaPredicted RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 PEG10Q86TG7 708 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 PRR18Q8N4B5 295 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 OR1N1Q8NGS0 311 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 EIF5A2Q9GZV4 153 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 EIF3GO75821 320 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP42-203ENST00000426246 CPN1P15169 458 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 CASRP41180 1078 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 CX3CR1P49238 355 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 NKAIN1Q4KMZ8 207 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 LY6G6FQ5SQ64 297 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 ZNF684Q5T5D7 378 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms