RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 OR2AE1Q8NHA4 323 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 C15orf40Q8WUR7 153 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 SMIM4Q8WVI0 70 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 NANOS1Q8WY41 292 aaKnown RBP13.2□□□□□ -0.3
ACTB-204ENST00000425660 YIPF5Q969M3 257 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 POM121L2Q96KW2 1035 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 ZNF75AQ96N20 296 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 NKX3-1Q99801 234 aaPredicted RBP13.2□□□□□ -0.3
ACTB-204ENST00000425660 FBLN5Q9UBX5 448 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 hCG_38984A0A1B0GV85 526 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 FIGNL2A6NMB9 653 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 XRCC3O43542 346 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 LANCL1O43813 399 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 CRHP06850 196 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 EDN3P14138 238 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 PRF1P14222 555 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 FAHP16930 419 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 ACKR3P25106 362 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 RANBP1P43487 201 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 TDGF1P3P51864 188 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 EFNB2P52799 333 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 MRPS10P82664 201 aaKnown RBP13.2□□□□□ -0.3
ACTB-204ENST00000425660 FOXF2Q12947 444 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 OR8B8Q15620 311 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 GSG1Q2KHT4 349 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 EIF2S3LQ2VIR3 472 aaKnown RBP13.2□□□□□ -0.3
ACTB-204ENST00000425660 TMEM69Q5SWH9 247 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 VWA1Q6PCB0 445 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 NRARPQ7Z6K4 114 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 CNEP1R1Q8N9A8 125 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 C11orf54Q9H0W9 315 aaPredicted RBP13.2□□□□□ -0.3
ACTB-204ENST00000425660 PIGLQ9Y2B2 252 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 MRPS7Q9Y2R9 242 aaKnown RBP13.2□□□□□ -0.3
ACTB-204ENST00000425660 FAM215AQ9Y5M1 114 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 ZZEF1O43149 2961 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 CIB4A0PJX0 185 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 SSX4O60224 188 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 TOXO94900 526 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 BPNT1O95861 308 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 CGAP01215 116 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 TMIGD3P0DMS9 266 aaPredicted RBP13.19□□□□□ -0.3
ACTB-204ENST00000425660 RAB6AP20340 208 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 QRFPP83859 136 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 FAM3AP98173 230 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 PLP2Q04941 152 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 RIPPLY1Q0D2K3 151 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 TMEM42Q69YG0 159 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 CCBE1Q6UXH8 406 aaPredicted RBP13.19□□□□□ -0.3
ACTB-204ENST00000425660 DNM1P46Q6ZS02 220 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 BIVMQ86UB2 503 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 GABRG1Q8N1C3 465 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 C1orf162Q8NEQ5 155 aaPredicted RBP13.19□□□□□ -0.3
ACTB-204ENST00000425660 AKAP1Q92667 903 aaKnown RBP eCLIP13.19□□□□□ -0.3
ACTB-204ENST00000425660 ITFG2Q969R8 447 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 SLC22A4Q9H015 551 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 TUBD1Q9UJT1 453 aa13.19□□□□□ -0.3
ACTB-204ENST00000425660 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 C5orf49A4QMS7 147 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 A6NJ64 397 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 GABARAPH6UMI1 98 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 EEF1E1O43324 174 aaKnown RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 SERPINA5P05154 406 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 SPNP16150 400 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 TIMP3P35625 211 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 MAP2K3P46734 347 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 TAS2R20P59543 309 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 ZNF92Q03936 586 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 GABRA6Q16445 453 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 IZUMO1Q8IYV9 350 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 FAM57AQ8TBR7 257 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 STARD4Q96DR4 205 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 ZC3HAV1LQ96H79 300 aaKnown RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 DOCK7Q96N67 2140 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 KCNK15Q9H427 330 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 RBFOX1Q9NWB1 397 aaKnown RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 TPOP07202 933 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 HOXD4P09016 255 aaPredicted RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 DGCR2P98153 550 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 KRT74Q7RTS7 529 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 CD163Q86VB7 1156 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 APOBEC3DQ96AK3 386 aaPredicted RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 ITPKCQ96DU7 683 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 C1orf147Q96MC9 270 aaPredicted RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 SLX1AQ9BQ83 275 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 ZNF71Q9NQZ8 489 aaPredicted RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 DIABLOQ9NR28 239 aa13.18□□□□□ -0.3
ACTB-204ENST00000425660 RBMX2Q9Y388 322 aaKnown RBP13.18□□□□□ -0.3
ACTB-204ENST00000425660 LYRM1O43325 122 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 HCKP08631 526 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 FAM157BP0CG42 384 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 ALDH3B1P43353 468 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 GSK3AP49840 483 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 PER3P56645 1201 aa13.17□□□□□ -0.3
ACTB-204ENST00000425660 KISS1Q15726 138 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms