RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 IFNB1P01574 187 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CSF2P04141 144 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 HIST1H2AGP0C0S8 130 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 OR56A5P0C7T3 313 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 SLC2A1P11166 492 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ETS1P14921 441 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 HIST1H1BP16401 226 aaKnown RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ZNF25P17030 456 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RCC1P18754 421 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TSPAN8P19075 237 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PVALBP20472 110 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 NPR2P20594 1047 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CYP2B6P20813 491 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 HNF1AP20823 631 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 GALP22466 123 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 AHCYP23526 432 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PSMB9P28065 219 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 DDTP30046 118 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 S100A11P31949 105 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RAB5BP61020 215 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PKIAP61925 76 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RAP1AP62834 184 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PAX5Q02548 391 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 FABP9Q0Z7S8 132 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TFCP2Q12800 502 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ELAVL3Q14576 367 aaKnown RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 HEPACAMQ14CZ8 416 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 OR8G1Q15617 311 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ZIC1Q15915 447 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 AKIRIN2Q53H80 203 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PYCR3Q53H96 274 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PYY3Q5JQD4 70 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 SPANXN2Q5MJ10 180 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RIPPLY2Q5TAB7 128 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TTC23Q5W5X9 447 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 HIST2H2AA3Q6FI13 130 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ETFRF1Q6IPR1 90 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 FAM45BPQ6NSW5 357 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ACSM5Q6NUN0 579 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 HAGHLQ6PII5 290 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RNF165Q6ZSG1 346 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RASSF6Q6ZTQ3 369 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PGAP1Q75T13 922 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 COPS6Q7L5N1 327 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 DCXRQ7Z4W1 244 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 NAA40Q86UY6 237 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 THOC6Q86W42 341 aaKnown RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CBLN2Q8IUK8 224 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 MISPQ8IVT2 679 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RIMKLAQ8IXN7 391 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PUSL1Q8N0Z8 303 aaKnown RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ZFP82Q8N141 532 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CCDC54Q8NEL0 328 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 OR2L3Q8NG85 312 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 OR11H7Q8NGC8 314 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 OR1S1Q8NH92 325 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ACTL9Q8TC94 416 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 FAM45AQ8TCE6 357 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RNASE8Q8TDE3 154 aaKnown RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 GPR151Q8TDV0 419 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TCTEX1D2Q8WW35 142 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 C22orf15Q8WYQ4 148 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TNFRSF14Q92956 283 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 UCN3Q969E3 161 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 KIAA1143Q96AT1 154 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 UPRTQ96BW1 309 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CCDC126Q96EE4 140 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 L3HYPDHQ96EM0 354 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 AURKBQ96GD4 344 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ZBED3Q96IU2 234 aaPredicted RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 Q96MT0 163 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RDH12Q96NR8 316 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 MS4A4EQ96PG1 132 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 IL4I1Q96RQ9 567 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CYP2S1Q96SQ9 504 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ADPGKQ9BRR6 497 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM208Q9BTX3 173 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 DERL2Q9GZP9 239 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ING2Q9H160 280 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 FBXO44Q9H4M3 255 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 VAT1LQ9HCJ6 419 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ACOT13Q9NPJ3 140 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 ADA2Q9NZK5 511 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 MED11Q9P086 117 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 CLEC2DQ9UHP7 191 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PSORS1C1Q9UIG5 152 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 STAP1Q9ULZ2 295 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 NDRG2Q9UN36 371 aaKnown RBP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RPH3ALQ9UNE2 315 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 RNF6Q9Y252 685 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 SLC9A8Q9Y2E8 581 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 POFUT2Q9Y2G5 429 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 PUS1Q9Y606 427 aaKnown RBP eCLIP2.37□□□□□ -2.03
LINC01040-201ENST00000425048 NPTNQ9Y639 398 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TEX264Q9Y6I9 313 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 SHROOM3Q8TF72 1996 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 FRMPD3Q5JV73 1810 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 GBF1Q92538 1859 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 TRPM7Q96QT4 1865 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 KIF26AQ9ULI4 1882 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms