RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 H0YIZ8 118 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 TRAF3IP2O43734 574 aaPredicted RBP12.79□□□□□ -0.36
HDAC9-208ENST00000417496 TSPAN9O75954 239 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 IGHG1P01857 330 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 CRHP06850 196 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 NOXO1Q8NFA2 376 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 ELP5Q8TE02 316 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 ADAT1Q9BUB4 502 aaKnown RBP12.79□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF768Q9H5H4 540 aaKnown RBP12.79□□□□□ -0.36
HDAC9-208ENST00000417496 SDHAF3Q9NRP4 125 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 MYOTQ9UBF9 498 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 NPIPB13A6NJU9 1138 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 NPIPB4C9JG80 1138 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 SCRG1O75711 98 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 CX3CR1P49238 355 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 SRSF3P84103 164 aaKnown RBP12.79□□□□□ -0.36
HDAC9-208ENST00000417496 TMEM200AQ86VY9 491 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 DTWD2Q8NBA8 298 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 OR4K17Q8NGC6 315 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 NUBPLQ8TB37 319 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 PAQR8Q8TEZ7 354 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 TMEM230Q96A57 120 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 TMEM59Q9BXS4 323 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 TGIF2Q9GZN2 237 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 SEMA5BQ9P283 1151 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 GLS2Q9UI32 602 aa12.79□□□□□ -0.36
HDAC9-208ENST00000417496 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
HDAC9-208ENST00000417496 MSGN1A6NI15 193 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 DBX1A6NMT0 343 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 BCAT2O15382 392 aaPredicted RBP12.78□□□□□ -0.36
HDAC9-208ENST00000417496 HIST1H1DP16402 221 aaKnown RBP12.78□□□□□ -0.36
HDAC9-208ENST00000417496 MPZP25189 248 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 WDR74Q6RFH5 385 aaPredicted RBP12.78□□□□□ -0.36
HDAC9-208ENST00000417496 ZNF283Q8N7M2 679 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 ARPC5LQ9BPX5 153 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 PNRC2Q9NPJ4 139 aaKnown RBP12.78□□□□□ -0.36
HDAC9-208ENST00000417496 FSCN3Q9NQT6 498 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 WIF1Q9Y5W5 379 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 A0A1W2PNV4 684 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 GPR31O00270 319 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 DHPSP49366 369 aaPredicted RBP12.78□□□□□ -0.36
HDAC9-208ENST00000417496 GPR85P60893 370 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 ARFRP1Q13795 201 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 SGCAQ16586 387 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 CLEC18BQ6UXF7 455 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 ZSCAN4Q8NAM6 433 aaPredicted RBP12.78□□□□□ -0.36
HDAC9-208ENST00000417496 MRGPRX4Q96LA9 322 aa12.78□□□□□ -0.36
HDAC9-208ENST00000417496 MYO7BQ6PIF6 2116 aa12.77□□□□□ -0.36
HDAC9-208ENST00000417496 NCOA6Q14686 2063 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-208ENST00000417496 F5H5K5 113 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF43P17038 809 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 GLRA1P23415 457 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 SUMO3P55854 103 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-208ENST00000417496 TMEM128Q5BJH2 165 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 FAM122CQ6P4D5 195 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 GUSBP11Q6P575 273 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 TMEM88Q6PEY1 159 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 PIK3IP1Q96FE7 263 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 DNTTIP1Q9H147 329 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 IGLV3-12A0A075B6K2 115 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 IGHV3-15A0A0B4J1V0 119 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 CELA2AP08217 269 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 AFF3P51826 1226 aaKnown RBP12.77□□□□□ -0.37
HDAC9-208ENST00000417496 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.37
HDAC9-208ENST00000417496 ANKRD55Q3KP44 614 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 FAHD2BQ6P2I3 314 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-208ENST00000417496 TMEM17Q86X19 198 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 CARFQ8N187 725 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 WDSUB1Q8N9V3 476 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 KCNG3Q8TAE7 436 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 FAHD2AQ96GK7 314 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 CRB3Q9BUF7 120 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF416Q9BWM5 594 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 OR5AC2Q9NZP5 309 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 GPR132Q9UNW8 380 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 SRPK3Q9UPE1 567 aa12.77□□□□□ -0.37
HDAC9-208ENST00000417496 COL6A3P12111 3177 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 MBTPS2O43462 519 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 ACTL6AO96019 429 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-208ENST00000417496 CHRM2P08172 466 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 PRSS12P56730 875 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 SHBQ15464 509 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 SLC25A47Q6Q0C1 308 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 CPEB2Q7Z5Q1 589 aaKnown RBP12.76□□□□□ -0.37
HDAC9-208ENST00000417496 FOXRED2Q8IWF2 684 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 GTPBP8Q8N3Z3 284 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-208ENST00000417496 LRRC18Q8N456 261 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 RTBDNQ9BSG5 229 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-208ENST00000417496 TMEM231Q9H6L2 316 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 ZNF726A6NNF4 738 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 G3V3Y1 287 aa12.76□□□□□ -0.37
HDAC9-208ENST00000417496 SLC6A9P48067 706 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms