RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 OR5P2Q8WZ92 322 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 OR5B2Q96R09 309 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 PLA2G12AQ9BZM1 189 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ANKRD19PQ9H560 264 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 INPP5EQ9NRR6 644 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 HRASLS2Q9NWW9 162 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 HEBP2Q9Y5Z4 205 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ZFHX2Q9C0A1 2572 aaPredicted RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ZNF318Q5VUA4 2279 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 MDC1Q14676 2089 aaKnown RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 TRAV1-2A0A0B4J238 106 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 TRAPPC13A5PLN9 417 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 FAM90A10PA6NDY2 464 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 LMO7DNF2Z398 122 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 NKX2-8O15522 239 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 PLPP2O43688 288 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 RAD1O60671 282 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 ATG12O94817 140 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 S100A8P05109 93 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SERPINE2P07093 398 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SMIM6P0DI80 62 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SPTBP11277 2137 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 VPREB1P12018 145 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 NR2C1P13056 603 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 RNASE12Q5GAN4 147 aaKnown RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SFRP4Q6FHJ7 346 aaPredicted RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 COMMD6Q7Z4G1 85 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 CEACAM19Q7Z692 300 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 GKN2Q86XP6 184 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 SPAG16Q8N0X2 631 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 TMEM123Q8N131 208 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 C12orf45Q8N5I9 185 aaPredicted RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 NECAP1Q8NC96 275 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 OR4D11Q8NGI4 311 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 OR9G4Q8NGQ1 327 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 OR5W2Q8NH69 310 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 CPNE4Q96A23 557 aaPredicted RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 NARS2Q96I59 477 aaKnown RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 PIGMQ9H3S5 423 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 EGLN3Q9H6Z9 239 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 NOX3Q9HBY0 568 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 MIEF1Q9NQG6 463 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 NTMQ9P121 344 aa8.34□□□□□ -1.07
SNHG3-201ENST00000413987 CSDC2Q9Y534 153 aaKnown RBP8.34□□□□□ -1.07
SNHG3-201ENST00000413987 DUXAA6NLW8 204 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 C4orf51C9J302 202 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 GABARAPH6UMI1 98 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ARPC1BO15143 372 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SURF4O15260 269 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 EMC8O43402 210 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 OR10H2O60403 315 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SERPINA5P05154 406 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 GFERP55789 205 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 OR10A3P58181 314 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 TAS2R50P59544 299 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 MRPS10P82664 201 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 PJVKQ0ZLH3 352 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 TRAM2Q15035 370 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 DEFB110Q30KQ9 67 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 OLFML2AQ68BL7 652 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SLC35F3Q8IY50 421 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ZFP82Q8N141 532 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 LNX2Q8N448 690 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 RAB42Q8N4Z0 105 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 BMPERQ8N8U9 685 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 OR10K1Q8NGX5 313 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ABHD4Q8TB40 342 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 C15orf40Q8WUR7 153 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 F2RL3Q96RI0 385 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 AICDAQ9GZX7 198 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 OR51I1Q9H343 314 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 CXorf36Q9H7Y0 433 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ANKRD10Q9NXR5 420 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 MUC6Q6W4X9 2439 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF292O60281 2723 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 DCHS1Q96JQ0 3298 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 LAMA5O15230 3695 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 KIR2DS5A0A0G2JLQ3 304 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 A0A0G2JNG1 304 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 J3QRE1 110 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 KIR2DS3K7RE56 304 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SULT1C2O00338 296 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 CTSVO60911 334 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 KHDRBS3O75525 346 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 HEXAP06865 529 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 GP1BAP07359 652 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 CD63P08962 238 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 RNF224P0DH78 156 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SMIM10L1P0DMW3 83 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 PNLIPP16233 465 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 MGMTP16455 207 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 NDUFS1P28331 727 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 PPP2R1BP30154 601 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 GPR143P51810 404 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 NR0B1P51843 470 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ART1P52961 327 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 OR1D5P58170 312 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 KIR2DS5Q14953 304 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 MPPED2Q15777 294 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms