RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 RBBP8Q99708 897 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 CCT7Q99832 543 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 KCTD14Q9BQ13 255 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM175Q9BSA9 504 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 MED10Q9BTT4 135 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 KIFC1Q9BW19 673 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 PLA2G2FQ9BZM2 168 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 LINC00597Q9H2U6 94 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 SGK2Q9HBY8 427 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 COX16Q9P0S2 106 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 EXTL2Q9UBQ6 330 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF639Q9UID6 485 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 CLEC4AQ9UMR7 237 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 PEX16Q9Y5Y5 336 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 TNRC6BQ9UPQ9 1833 aaKnown RBP2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 PCNTO95613 3336 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 DNAH12Q6ZR08 3092 aa2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 SNRNP200O75643 2136 aaKnown RBP2.23□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGLV4-60A0A075B6I1 120 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGKV1D-13A0A0B4J2D9 117 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 A0A0D9SEW6 157 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 GOLGA6L7A0A1B0GV03 622 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 A0A1W2PPV9 198 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 COCHO43405 550 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ANGPTL7O43827 346 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 PLIN3O60664 434 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZMPSTE24O75844 475 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 C1orf105O95561 183 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 BPGMP07738 259 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 KRT16P08779 473 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC35E2BP0CK96 405 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 IGKV1-13P0DP09 117 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 CCNB1P14635 433 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 BGNP21810 368 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ALDH3A1P30838 453 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 PHBP35232 272 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC1A2P43004 574 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 RPS9P46781 194 aaKnown RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR1G1P47890 313 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF140P52738 457 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 UGT2B15P54855 530 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 CDH4P55283 916 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 CCL23P55773 120 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SEC61GP60059 68 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ACTR1AP61163 376 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 MAXP61244 160 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 RPL10AP62906 217 aaKnown RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 KCNJ2P63252 427 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ACTA1P68133 377 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 BST1Q10588 318 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 IFT88Q13099 833 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 NAB1Q13506 487 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 AQP6Q13520 282 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ARHGAP19Q14CB8 494 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 FAM83EQ2M2I3 478 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 TTLL9Q3SXZ7 439 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SPANXN3Q5MJ09 141 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR2A2Q6IF42 318 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR52W1Q6IF63 320 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 C4orf22Q6V702 233 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 CYHR1Q6ZMK1 362 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZCCHC23Q6ZST2 131 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC25A48Q6ZT89 311 aaKnown RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 C3orf62Q6ZUJ4 267 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRRC6Q86X45 466 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 PDIK1LQ8N165 341 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 BHLHE23Q8NDY6 225 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR1L4Q8NGR5 311 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SPPL2BQ8TCT7 592 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 ZNF75CPQ92670 426 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 FBXO32Q969P5 355 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SERPINB11Q96P15 392 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 CYTH2Q99418 400 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 VAT1Q99536 393 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 GPR22Q99680 433 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SH3GL1Q99961 368 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SH3GL3Q99963 347 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 FAM107BQ9H098 131 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 STMN4Q9H169 189 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 LRRC40Q9H9A6 602 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 FN3KRPQ9HA64 309 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 MRM3Q9HC36 420 aaKnown RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 SLC40A1Q9NP59 571 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 FBXO6Q9NRD1 293 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 TMEM216Q9P0N5 145 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR12D3Q9UGF7 316 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 STOML2Q9UJZ1 356 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 VANGL2Q9ULK5 521 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 OR51B4Q9Y5P0 310 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 NPTNQ9Y639 398 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 FANCMQ8IYD8 2048 aa2.22□□□□□ -2.05
HMGB1P11-201ENST00000413899 COL5A1P20908 1838 aaPredicted RBP2.21□□□□□ -2.05
HMGB1P11-201ENST00000413899 SRCAPQ6ZRS2 3230 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 A0A1B0GVI7 797 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 LOC285095A0A1B0GVY8 99 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR51F1A6NGY5 319 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 OR52A4PA6NMU1 304 aa2.21□□□□□ -2.06
HMGB1P11-201ENST00000413899 GOLGA8TH3BQL2 631 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms