RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 HPSE2Q8WWQ2 592 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 RND1Q92730 232 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF436Q9C0F3 470 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 DNTTIP1Q9H147 329 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 GDF2Q9UK05 429 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 SLC5A6Q9Y289 635 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 CCDC88CQ9P219 2028 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 F5H0A9 414 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 HTR3BO95264 441 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 C1QCP02747 245 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 OR10J4P0C629 311 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 BDKRB2P30411 391 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF81P51508 661 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 SLC17A1Q14916 467 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 OXA1LQ15070 435 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 SPIN3Q5JUX0 258 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 SFXN4Q6P4A7 337 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 PET117Q6UWS5 81 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 NKAIN3Q8N8D7 197 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 ASB5Q8WWX0 329 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 GMPPAQ96IJ6 420 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-211ENST00000413186 TXNDC15Q96J42 360 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 CNTD2Q9H8S5 307 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 B3GAT1Q9P2W7 334 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 CLEC2DQ9UHP7 191 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 KCNE5Q9UJ90 142 aa7.6□□□□□ -1.19
SYNE1-211ENST00000413186 A0A096LPE4 126 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 A0A1W2PPZ6 126 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 LRP5LA4QPB2 252 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 HPGDSO60760 199 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 CBR1P16152 277 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 FGF9P31371 208 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-211ENST00000413186 RAD52P43351 418 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 RPS10P46783 165 aaKnown RBP7.59□□□□□ -1.19
SYNE1-211ENST00000413186 INPP5JQ15735 1006 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-211ENST00000413186 GCNT2Q8N0V5 402 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF565Q8N9K5 539 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 OTOSQ8NHW6 89 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 NINJ1Q92982 152 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 OPALINQ96PE5 141 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 CABLES2Q9BTV7 478 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 ABHD6Q9BV23 337 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF442Q9H7R0 627 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 DNAJB11Q9UBS4 358 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 PPP1R3CQ9UQK1 317 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 MSRB2Q9Y3D2 182 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 DOPEY2Q9Y3R5 2298 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 HTTP42858 3142 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 A0A0J9YW62 118 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 P2RY10O00398 339 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 TNFSF12O43508 249 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 HRGP04196 525 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 ETV1P50549 477 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 MEF2DQ14814 521 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 RTP5Q14D33 572 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 RNASE10Q5GAN6 216 aaKnown RBP7.59□□□□□ -1.19
SYNE1-211ENST00000413186 LYSMD2Q8IV50 215 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 IL17RDQ8NFM7 739 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 ASB10Q8WXI3 467 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 MCHR2Q969V1 340 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 OR2M2Q96R28 347 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 PRSS27Q9BQR3 290 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 RPS10P5Q9NQ39 176 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 NIT2Q9NQR4 276 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 TRAV6A0A075B6T7 132 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 F8W036 122 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 TRAPPC2LH3BP13 241 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 KLRB1Q12918 225 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 STEAP3Q658P3 488 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 VHLLQ6RSH7 139 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 APOOLQ6UXV4 268 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 BOLLQ8N9W6 283 aaKnown RBP7.59□□□□□ -1.19
SYNE1-211ENST00000413186 AKIP1Q9NQ31 210 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 ZNF391Q9UJN7 358 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 CHCHD2Q9Y6H1 151 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-211ENST00000413186 R4GMQ9 66 aa7.59□□□□□ -1.19
SYNE1-211ENST00000413186 FANCMQ8IYD8 2048 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 MEIOCA2RUB1 952 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 FAM181BA6NEQ2 426 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF16P17020 682 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 HOXB9P17482 250 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 RPS19P39019 145 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 GSG1Q2KHT4 349 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 OR6V1Q8N148 313 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 RBMXL3Q8N7X1 1067 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 EXTL1Q92935 676 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 OR8B4Q96RC9 309 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 EGLN1Q9GZT9 426 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 SLA2Q9H6Q3 261 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 SPACA1Q9HBV2 294 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 WASF3Q9UPY6 502 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 APC2O95996 2303 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 A0A1B0GTH9 108 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 OR6C68A6NDL8 312 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 GPX5O75715 221 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 MPIG6BO95866 241 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 MT-CO2P00403 227 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms