RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 EBF4Q9BQW3 602 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 TRIM15Q9C019 465 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 COA1Q9GZY4 146 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 OR51B5Q9H339 312 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 PRORYQ9H606 182 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 PANK3Q9H999 370 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 SLC40A1Q9NP59 571 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 MTFP1Q9UDX5 166 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF629Q9UEG4 869 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-204ENST00000412061 MOB4Q9Y3A3 225 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 PRSS21Q9Y6M0 314 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 USH1CQ9Y6N9 552 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 PCNX3Q9H6A9 2034 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 IGLV8-61A0A075B6I0 122 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 IGKV3D-15A0A087WSY6 115 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 IGHV3-35A0A0C4DH35 117 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF233A6NK53 670 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 CENPBD1B2RD01 187 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 LRRN3E7EW58 273 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 M0QZ92 97 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 HAT1O14929 419 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 SLC16A4O15374 487 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 SLC31A1O15431 190 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 FGF16O43320 207 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 CYTH3O43739 400 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 HPGDSO60760 199 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 IFNA5P01569 189 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 RPS17P08708 135 aaKnown RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF883P0CG24 379 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF35P13682 527 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 COX7A1P24310 79 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 RPA3P35244 121 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 NKX2-5P52952 324 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 FGF8P55075 233 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 CLDN12P56749 244 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 OR12D2P58182 307 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 AP3S2P59780 193 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 VBP1P61758 197 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 CACNG7P62955 275 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 REEP5Q00765 189 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 IL5RAQ01344 420 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 SMARCB1Q12824 385 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 QPRTQ15274 297 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 FCN2Q15485 313 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 IMPG1Q17R60 797 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 RFX4Q33E94 735 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 PDZD11Q5EBL8 140 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 MED27Q6P2C8 311 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 TTC33Q6PID6 262 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 TEX43Q6ZNM6 134 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 USP50Q70EL3 339 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 ZNF440Q8IYI8 595 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 SLC34A3Q8N130 599 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 Q8N402 240 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 OR10AD1Q8NGE0 317 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 S100PBPQ96BU1 408 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 ZMYND19Q96E35 227 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 MBOAT7Q96N66 472 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 ARHGDIGQ99819 225 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 SLIRPQ9GZT3 109 aaKnown RBP3.4□□□□□ -1.87
BRCA1-204ENST00000412061 DEFB127Q9H1M4 99 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 OR51V1Q9H2C8 321 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 CLMPQ9H6B4 373 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 PTGES2Q9H7Z7 377 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 PLGRKTQ9HBL7 147 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 SH2D2AQ9NP31 389 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 RGS18Q9NS28 235 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 TAS2R9Q9NYW1 312 aa3.4□□□□□ -1.87
BRCA1-204ENST00000412061 NUP153P49790 1475 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 PCDH11XQ9BZA7 1347 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 CIB4A0PJX0 185 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 GJE1A6NN92 205 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 F5H768 121 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 TNFRSF11BO00300 401 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 XKRYO14609 159 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 KMOO15229 486 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 VAMP5O95183 116 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 HLA-AP01891 365 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 IFNA6P05013 189 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 CTXN2P0C2S0 81 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 SLC35G6P0C7Q6 338 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 NQO1P15559 274 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 ZP3P21754 424 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 GGT2P36268 569 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 OR3A4PP47883 348 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 STC1P52823 247 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 RAB38P57729 211 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 RAB8AP61006 207 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 B2MP61769 119 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 RPS23P62266 143 aaKnown RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 MS4A2Q01362 244 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 PAX8Q06710 450 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 EGFEM1PQ0D2K5 195 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 ARFRP1Q13795 201 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 PRPSAP1Q14558 356 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 DNAL1Q4LDG9 190 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 PRR30Q53SZ7 412 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 MOB1BQ7L9L4 216 aa3.39□□□□□ -1.87
BRCA1-204ENST00000412061 HSD17B13Q7Z5P4 300 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-204ENST00000412061 STX12Q86Y82 276 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms