RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OR5L1Q8NGL2 311 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 OR10G9Q8NGN4 311 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 LRRC29Q8WV35 223 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 ESR2Q92731 530 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 PPWD1Q96BP3 646 aaKnown RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 S100PBPQ96BU1 408 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 GALNT14Q96FL9 552 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 VSIG2Q96IQ7 327 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 APOL4Q9BPW4 351 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 API5Q9BZZ5 524 aaKnown RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 MTFP1Q9UDX5 166 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 SLC7A11Q9UPY5 501 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 PRG3Q9Y2Y8 225 aaPredicted RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 SIGLEC9Q9Y336 463 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 POLR3HQ9Y535 204 aaPredicted RBP3.68□□□□□ -1.82
LSM5-205ENST00000409952 MAP3K15Q6ZN16 1313 aa3.68□□□□□ -1.82
LSM5-205ENST00000409952 TRAV8-4A0A0B4J246 113 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 IGHV3OR16-9A0A0B4J2B5 98 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 CENPBD1B2RD01 187 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 LINC01619G3V211 115 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 XKRYO14609 159 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 PHF1O43189 567 aaPredicted RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 HPGDSO60760 199 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 SERF1AO75920 110 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 ZNF432O94892 652 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 RPP14O95059 124 aaKnown RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 P01737 135 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 HLA-AP01891 365 aaKnown RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 CFC1BP0CG36 223 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 CFC1P0CG37 223 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 CD1EP15812 388 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 RCC1P18754 421 aaPredicted RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 MT3P25713 68 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 GTF2H1P32780 548 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 RPS9P46781 194 aaKnown RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 RPL10AP62906 217 aaKnown RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 ZNF45Q02386 682 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 KDSRQ06136 332 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 PON3Q15166 354 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 OR1Q1Q15612 314 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 TIMM50Q3ZCQ8 353 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 TFDP3Q5H9I0 405 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 COA6Q5JTJ3 125 aaKnown RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 ENTHD1Q8IYW4 607 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 FAM71E2Q8N5Q1 922 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 ACBD4Q8NC06 268 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 OR51Q1Q8NH59 317 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 OR2AE1Q8NHA4 323 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 NT5CQ8TCD5 201 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 GTSF1Q8WW33 167 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 RGP1Q92546 391 aaPredicted RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 AURKBQ96GD4 344 aaPredicted RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 FAM19A4Q96LR4 140 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 RDH12Q96NR8 316 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 SIGLEC12Q96PQ1 595 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 TEAD3Q99594 435 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 SULT4A1Q9BR01 284 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 SLIRPQ9GZT3 109 aaKnown RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 ZNF702PQ9H963 129 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 DDIT4Q9NX09 232 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 IL17CQ9P0M4 197 aa3.67□□□□□ -1.82
LSM5-205ENST00000409952 TRMT112Q9UI30 125 aaKnown RBP3.67□□□□□ -1.82
LSM5-205ENST00000409952 NOTCH4Q99466 2003 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 A0A1W2PRG6 482 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 OR6C70A6NIJ9 312 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 GPR171O14626 319 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 GNAO1P09471 354 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 MLNP12872 115 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 ZNF7P17097 686 aaPredicted RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 PVALBP20472 110 aaPredicted RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 HTR1DP28221 377 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 MDH2P40926 338 aaKnown RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 NCBP2P52298 156 aaKnown RBP eCLIP3.66□□□□□ -1.82
LSM5-205ENST00000409952 RAB38P57729 211 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 ACTBP60709 375 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 RAB8AP61006 207 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 RPS23P62266 143 aaKnown RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 ACTG1P63261 375 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 IL5RAQ01344 420 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 REG3AQ06141 175 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 TOMM34Q15785 309 aaPredicted RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 IMPG1Q17R60 797 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 CEACAM21Q3KPI0 293 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 SYT6Q5T7P8 510 aaPredicted RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 FAM45BPQ6NSW5 357 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 MED27Q6P2C8 311 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 PAMR1Q6UXH9 720 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 GAPTQ8N292 157 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 C11orf72Q8NBR9 251 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 CCDC112Q8NEF3 446 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 OR4S2Q8NH73 311 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 SYNPRQ8TBG9 265 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 RXFP2Q8WXD0 754 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 UCN3Q969E3 161 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 RPUSD4Q96CM3 377 aaKnown RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 ZMYND19Q96E35 227 aaPredicted RBP3.66□□□□□ -1.82
LSM5-205ENST00000409952 RNF185Q96GF1 192 aa3.66□□□□□ -1.82
LSM5-205ENST00000409952 LINC00479Q96M42 142 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms