RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FBXL3Q9UKT7 428 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 WIF1Q9Y5W5 379 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 KCNE3Q9Y6H6 103 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 WDR62O43379 1518 aa3.44□□□□□ -1.86
HMGB1P13-201ENST00000406019 PBRM1Q86U86 1689 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 WDR7Q9Y4E6 1490 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 NUP155O75694 1391 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 A0A0A6YYH2 397 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 A6NJ64 397 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLC22A20A6NK97 555 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF729A6NN14 1252 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 HIDE1A8MVS5 230 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 E5RI56 91 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 H3BNH8 94 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 BET1O15155 118 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 ERI3O43414 337 aaKnown RBP3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 RAD51CO43502 376 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 XRCC2O43543 280 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 SMIM24O75264 130 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 TNFSF13O75888 250 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 ARG1P05089 322 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 HLA-DMAP28067 261 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 MPIP34949 423 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 RFC3P40938 356 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 KCNJ3P48549 501 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 HCAR3P49019 387 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 PSMD4P55036 377 aaKnown RBP3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 PSME3P61289 254 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 SEMG2Q02383 582 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 MGAT3Q09327 533 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 HERPUD1Q15011 391 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 PON3Q15166 354 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 IRF4Q15306 451 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 GABRA6Q16445 453 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 GUCA2BQ16661 112 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 WHAMMP3Q1A5X7 153 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 TEX30Q5JUR7 227 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 ANKRD22Q5VYY1 191 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 FRMPD2BQ6IN97 320 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 C5orf46Q6UWT4 87 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 NPSR1Q6W5P4 371 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 ACP7Q6ZNF0 438 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 PLEKHG7Q6ZR37 379 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 LINC00173Q6ZV60 143 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 H2AFVQ71UI9 128 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 COX15Q7KZN9 410 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 DPPA2Q7Z7J5 298 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 TMEM104Q8NE00 496 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR10J6PQ8NGY7 276 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR51F2Q8NH61 342 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 LHFPL5Q8TAF8 219 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 GEMIN6Q8WXD5 167 aaKnown RBP3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 GTF2H4Q92759 462 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 APH1AQ96BI3 265 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 RASL11BQ9BPW5 248 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 KCNJ16Q9NPI9 418 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 RAB23Q9ULC3 237 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZFYVE9O95405 1425 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 NUP160Q12769 1436 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 NPATQ14207 1427 aa3.43□□□□□ -1.86
HMGB1P13-201ENST00000406019 A0A1B0GV90 55 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 A6NDN8 102 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 EFCAB10A6NFE3 127 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 OR2AT4A6NND4 320 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 NCBP2LA6PVI3 153 aaKnown RBP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 TMX2-CTNND1H3BSU7 103 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 CTNSO60931 367 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 HSBP1O75506 76 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 MED6O75586 246 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 CCNKO75909 580 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 CALB1P05937 261 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 AZU1P20160 251 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 PMCHP20382 165 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 GABRR2P28476 465 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 CTRLP40313 264 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 P2RY2P41231 377 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 OMPP47874 163 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 RND2P52198 227 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 NCBP2P52298 156 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ATP6V0D1P61421 351 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 LYZP61626 148 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 RBX1P62877 108 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ORC2Q13416 577 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZBTB6Q15916 424 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 IL17AQ16552 155 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 PAGE3Q5JUK9 113 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 CCNJQ5T5M9 372 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 OTPQ5XKR4 325 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF530Q6P9A1 599 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 CLEC18BQ6UXF7 455 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 FAM151BQ6UXP7 276 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 TEX43Q6ZNM6 134 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 PID1Q7Z2X4 250 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ENTHD1Q8IYW4 607 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 C11orf42Q8N5U0 333 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ITFG1Q8TB96 612 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ISOC2Q96AB3 205 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLC35E1Q96K37 410 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 MAGEB18Q96M61 343 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 FOXC2Q99958 501 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms