RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 PRF1P14222 555 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 SOX2P48431 317 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 BSPH1Q075Z2 132 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 SNTB1Q13884 538 aaKnown RBP18.92■□□□□ 0.62
EPCAM-202ENST00000405271 GK2Q14410 553 aaPredicted RBP18.92■□□□□ 0.62
EPCAM-202ENST00000405271 OR8B8Q15620 311 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 BEX5Q5H9J7 111 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 FOXB2Q5VYV0 432 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 FBXW12Q6X9E4 464 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 PGAP1Q75T13 922 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 OR14K1Q8NGZ2 314 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 C10orf35Q96D05 121 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 DGCR14Q96DF8 476 aaKnown RBP18.92■□□□□ 0.62
EPCAM-202ENST00000405271 KCTD7Q96MP8 289 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 REPIN1Q9BWE0 567 aaKnown RBP18.92■□□□□ 0.62
EPCAM-202ENST00000405271 ZNF275Q9NSD4 429 aaPredicted RBP18.92■□□□□ 0.62
EPCAM-202ENST00000405271 ABCA12Q86UK0 2595 aa18.92■□□□□ 0.62
EPCAM-202ENST00000405271 ATP6V1G2-DDX39BF2Z307 99 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 ABCD4O14678 606 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 IGFBP2P18065 325 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 MAP2K3P46734 347 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 RPS23P62266 143 aaKnown RBP18.91■□□□□ 0.62
EPCAM-202ENST00000405271 LSM3P62310 102 aaKnown RBP18.91■□□□□ 0.62
EPCAM-202ENST00000405271 FAM3AP98173 230 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 SNTB2Q13425 540 aaKnown RBP18.91■□□□□ 0.62
EPCAM-202ENST00000405271 C12orf43Q96C57 262 aaKnown RBP18.91■□□□□ 0.62
EPCAM-202ENST00000405271 SOX7Q9BT81 388 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 POFUT1Q9H488 388 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 LRBAP50851 2863 aa18.91■□□□□ 0.62
EPCAM-202ENST00000405271 CASKO14936 926 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 COX6B1P14854 86 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 FSTP19883 344 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 FBN2P35556 2912 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 KIR2DL3P43628 341 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 VBP1P61758 197 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 NCS1P62166 190 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 NKX6-1P78426 367 aaPredicted RBP18.9■□□□□ 0.62
EPCAM-202ENST00000405271 SPOCK1Q08629 439 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 HSD17B12Q53GQ0 312 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 ZBTB37Q5TC79 503 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 PIAS4Q8N2W9 510 aaPredicted RBP18.9■□□□□ 0.62
EPCAM-202ENST00000405271 PARP16Q8N5Y8 322 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 ACBD4Q8NC06 268 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 NUP37Q8NFH4 326 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 SEMA6DQ8NFY4 1073 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 KBTBD8Q8NFY9 601 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 SLC25A40Q8TBP6 338 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 PLPPR2Q96GM1 343 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 NOX4Q9NPH5 578 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 APCP25054 2843 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.9■□□□□ 0.62
EPCAM-202ENST00000405271 ZNF20P17024 532 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 MYL9P24844 172 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 GLRXP35754 106 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 MAGEB1P43366 347 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 GSK3AP49840 483 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 MARS2Q96GW9 593 aaKnown RBP18.9■□□□□ 0.62
EPCAM-202ENST00000405271 RADILQ96JH8 1075 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 SPOCK3Q9BQ16 436 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 OR2J1Q9GZK6 312 aa18.9■□□□□ 0.62
EPCAM-202ENST00000405271 PIN1P1O15428 100 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 CD3EP07766 207 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 RAC2P15153 192 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 CALRP27797 417 aaKnown RBP18.89■□□□□ 0.61
EPCAM-202ENST00000405271 THBS4P35443 961 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 RIPPLY1Q0D2K3 151 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 FAM27D1Q5T7N8 215 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 RGS7BPQ6MZT1 257 aaPredicted RBP18.89■□□□□ 0.61
EPCAM-202ENST00000405271 USP43Q70EL4 1123 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 DMRTC2Q8IXT2 367 aaPredicted RBP18.89■□□□□ 0.61
EPCAM-202ENST00000405271 CSNK2A3Q8NEV1 391 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 FAM222BQ8WU58 562 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 CKLFQ9UBR5 152 aa18.89■□□□□ 0.61
EPCAM-202ENST00000405271 ANKHD1Q8IWZ3 2542 aaKnown RBP18.88■□□□□ 0.61
EPCAM-202ENST00000405271 TACC2O95359 2948 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 GGT3PA6NGU5 568 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 LMX1BO60663 402 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 DDOSTP39656 456 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 MTNR1BP49286 362 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 ERVS71-1P61550 626 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 TNK1Q13470 666 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 HLXQ14774 488 aaPredicted RBP18.88■□□□□ 0.61
EPCAM-202ENST00000405271 ZNF718Q3SXZ3 478 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 SPATA46Q5T0L3 261 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 MBNL2Q5VZF2 373 aaKnown RBP18.88■□□□□ 0.61
EPCAM-202ENST00000405271 SLC22A25Q6T423 547 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 SERPINA12Q8IW75 414 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 FTMTQ8N4E7 242 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 PP6455Q8WZ26 134 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 FGGYQ96C11 551 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 ADAT3Q96EY9 351 aaPredicted RBP18.88■□□□□ 0.61
EPCAM-202ENST00000405271 SLITRK2Q9H156 845 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 RNF167Q9H6Y7 350 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 CRIM1Q9NZV1 1036 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 FOXJ3Q9UPW0 622 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 PIGLQ9Y2B2 252 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 CSMD1Q96PZ7 3565 aa18.88■□□□□ 0.61
EPCAM-202ENST00000405271 TRAV1-2A0A0B4J238 106 aa18.87■□□□□ 0.61
EPCAM-202ENST00000405271 A0A1W2PPK0 400 aa18.87■□□□□ 0.61
EPCAM-202ENST00000405271 SELEP16581 610 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms