RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SAV1Q9H4B6 383 aaPredicted RBP17.57■□□□□ 0.4
CCDC47-202ENST00000403162 DHCR7Q9UBM7 475 aaKnown RBP17.57■□□□□ 0.4
CCDC47-202ENST00000403162 RP1P56715 2156 aa17.57■□□□□ 0.4
CCDC47-202ENST00000403162 KCNAB3O43448 404 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 PNLIPP16233 465 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 DCDP81605 110 aaKnown RBP17.56■□□□□ 0.4
CCDC47-202ENST00000403162 HSF1Q00613 529 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 OR7A5Q15622 319 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 ACTBL2Q562R1 376 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 VAX1Q5SQQ9 334 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 DHRS7BQ6IAN0 325 aaPredicted RBP17.56■□□□□ 0.4
CCDC47-202ENST00000403162 ST8SIA1Q92185 356 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 NAT6Q93015 286 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 GSTP1P09211 210 aaKnown RBP17.56■□□□□ 0.4
CCDC47-202ENST00000403162 LYL1P12980 280 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 EMP2P54851 167 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 POU3F1Q03052 451 aaPredicted RBP17.56■□□□□ 0.4
CCDC47-202ENST00000403162 CFHR1Q03591 330 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 AIMP2Q13155 320 aaKnown RBP17.56■□□□□ 0.4
CCDC47-202ENST00000403162 STK11Q15831 433 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 SHEQ5VZ18 495 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 ANGPTL5Q86XS5 388 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 PLXDC1Q8IUK5 500 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 ARRDC1Q8N5I2 433 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 ZSCAN4Q8NAM6 433 aaPredicted RBP17.56■□□□□ 0.4
CCDC47-202ENST00000403162 OR13C9Q8NGT0 318 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 RRNAD1Q96FB5 475 aaKnown RBP17.56■□□□□ 0.4
CCDC47-202ENST00000403162 ARL5BQ96KC2 179 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 LPAR5Q9H1C0 372 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 CHST11Q9NPF2 352 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 MMP26Q9NRE1 261 aa17.56■□□□□ 0.4
CCDC47-202ENST00000403162 A0A0B4J2A0 478 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 FBLP22087 321 aaKnown RBP17.55■□□□□ 0.4
CCDC47-202ENST00000403162 ZNF93P35789 620 aaPredicted RBP17.55■□□□□ 0.4
CCDC47-202ENST00000403162 AKR1C2P52895 323 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 AKR1C1Q04828 323 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 MICBQ29980 383 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 NKAPLQ5M9Q1 402 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 TMEM71Q6P5X7 295 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 DRAM2Q6UX65 266 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 OR10H5Q8NGA6 315 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 IFI44Q8TCB0 444 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 C11orf40Q8WZ69 217 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 RAB18Q9NP72 206 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 SHPKQ9UHJ6 478 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 GPR132Q9UNW8 380 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 ANKUB1A6NFN9 424 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 H0YIZ8 118 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 CDX4O14627 284 aaPredicted RBP17.55■□□□□ 0.4
CCDC47-202ENST00000403162 SLC6A9P48067 706 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 DUSP3P51452 185 aaPredicted RBP17.55■□□□□ 0.4
CCDC47-202ENST00000403162 TMEM88Q6PEY1 159 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 RAB11FIP2Q7L804 512 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 RTN4RL2Q86UN3 420 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 SPAG16Q8N0X2 631 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 OR10S1Q8NGN2 331 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 RHBDD1Q8TEB9 315 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 NICN1Q9BSH3 213 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 MED29Q9NX70 200 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 KLHL13Q9P2N7 655 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 MLXQ9UH92 298 aa17.55■□□□□ 0.4
CCDC47-202ENST00000403162 A0A0A6YYD4 124 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 F8W036 122 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 FAM157CP0CG43 387 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 APOBEC1P41238 236 aaKnown RBP17.54■□□□□ 0.4
CCDC47-202ENST00000403162 BLOC1S1P78537 153 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 CCL7P80098 99 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 TLE3Q04726 772 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 SGCAQ16586 387 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 PLEKHN1Q494U1 663 aaPredicted RBP17.54■□□□□ 0.4
CCDC47-202ENST00000403162 IL34Q6ZMJ4 242 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 NAA40Q86UY6 237 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 TMEM230Q96A57 120 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 CNTNAP3BQ96NU0 1288 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 NUDT22Q9BRQ3 303 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 C5orf66Q9H5L9 145 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 CTSFQ9UBX1 484 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 PISDQ9UG56 409 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 ASXL3Q9C0F0 2248 aa17.54■□□□□ 0.4
CCDC47-202ENST00000403162 PHF3Q92576 2039 aaKnown RBP17.54■□□□□ 0.4
CCDC47-202ENST00000403162 SFT2D2O95562 160 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 HOXA1P49639 335 aaPredicted RBP17.53■□□□□ 0.4
CCDC47-202ENST00000403162 FOXK1P85037 733 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 PRSS54Q6PEW0 395 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 WDR74Q6RFH5 385 aaPredicted RBP17.53■□□□□ 0.4
CCDC47-202ENST00000403162 DBX2Q6ZNG2 339 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 TMPPEQ6ZT21 453 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 COX15Q7KZN9 410 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 ZNF101Q8IZC7 436 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 OR4A4PQ8NGN8 299 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 TMED6Q8WW62 240 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 MOB1AQ9H8S9 216 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 ZNF304Q9HCX3 659 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 FANCFQ9NPI8 374 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 ATXN7L1Q9ULK2 861 aaPredicted RBP17.53■□□□□ 0.4
CCDC47-202ENST00000403162 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 HIST1H1DP16402 221 aaKnown RBP17.53■□□□□ 0.4
CCDC47-202ENST00000403162 ZNF20P17024 532 aa17.53■□□□□ 0.4
CCDC47-202ENST00000403162 PVALBP20472 110 aaPredicted RBP17.53■□□□□ 0.4
CCDC47-202ENST00000403162 H3F3CQ6NXT2 135 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms