RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FUT6P51993 359 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 AVPI1Q5T686 147 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 TRGV5A0A0B4J1U4 118 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 SNRPGP15A8MWD9 76 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 LRP3O75074 770 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 ZFPL1O95159 310 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 MT-CO3P00414 261 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 IGHA2P01877 340 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 H2AFB1P0C5Y9 115 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 CBR1P16152 277 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 FGF9P31371 208 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-204ENST00000400337 THBS4P35443 961 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 PIGPP57054 158 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 LINC00303Q3SY05 128 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 PP6455Q8WZ26 134 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 TSPAN32Q96QS1 320 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 TRGV8A0A0C4DH27 118 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 LGALS8O00214 317 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 CDC42EP2O14613 210 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 NME2P1O60361 137 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 JTBO76095 146 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 CRYBB2P43320 205 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 GABRA4P48169 554 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 GSK3AP49840 483 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 RAB1AP62820 205 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 PIGMQ9H3S5 423 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 CYSLTR2Q9NS75 346 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 RER1O15258 196 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 IL9P15248 144 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 SPNP16150 400 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 SPEM2Q0P670 501 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 TOR2AQ5JU69 321 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 OR4S1Q8NGB4 309 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 GPX8Q8TED1 209 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 KISS1RQ969F8 398 aaPredicted RBP16.32■□□□□ 0.2
COL18A1-204ENST00000400337 SMOC1Q9H4F8 434 aa16.32■□□□□ 0.2
COL18A1-204ENST00000400337 TAGLN2P37802 199 aaKnown RBP16.31■□□□□ 0.2
COL18A1-204ENST00000400337 GPM6AP51674 278 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 SNTB1Q13884 538 aaKnown RBP16.31■□□□□ 0.2
COL18A1-204ENST00000400337 PWWP2BQ6NUJ5 590 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 ARHGEF39Q8N4T4 335 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 OR1J1Q8NGS3 322 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 APOBEC3DQ96AK3 386 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-204ENST00000400337 ADGRL4Q9HBW9 690 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 CDKN2AP42771 156 aaKnown RBP16.31■□□□□ 0.2
COL18A1-204ENST00000400337 C21orf58P58505 322 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 ACER2Q5QJU3 275 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 RTN4IP1Q8WWV3 396 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-204ENST00000400337 FSCN3Q9NQT6 498 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 TAAR5O14804 337 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 ICMTO60725 284 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 POU2F2P09086 479 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 FZD5Q13467 585 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 LYG2Q86SG7 212 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 ZNF416Q9BWM5 594 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 PLPP2O43688 288 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 PTHLHP12272 177 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 RPL12P30050 165 aaKnown RBP16.31■□□□□ 0.2
COL18A1-204ENST00000400337 TFF2Q03403 129 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 ZNF141Q15928 474 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 CD300LDQ6UXZ3 194 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 BTLAQ7Z6A9 289 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 ABI3BPQ7Z7G0 1075 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 OR10X1Q8NGY0 326 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 SMCO4Q9NRQ5 59 aa16.31■□□□□ 0.2
COL18A1-204ENST00000400337 NUP214P35658 2090 aaPredicted RBP16.31■□□□□ 0.2
COL18A1-204ENST00000400337 RAB19A4D1S5 217 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 F6UZH7 168 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 HLA-HP01893 362 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 SRSF5Q13243 272 aaKnown RBP16.3■□□□□ 0.2
COL18A1-204ENST00000400337 SSX1Q16384 188 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 TIGD3Q6B0B8 471 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 OR4D9Q8NGE8 314 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 C20orf24Q9BUV8 137 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 ST8SIA4Q92187 359 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 BTBD17A6NE02 478 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 LINC01387J3KSC0 135 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 AQP7O14520 342 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 TMEM127O75204 238 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 MGST1P10620 155 aaKnown RBP16.3■□□□□ 0.2
COL18A1-204ENST00000400337 H3F3CQ6NXT2 135 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 C1orf210Q8IVY1 113 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 AK3Q9UIJ7 227 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 C5orf67F2Z3F1 127 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 TERTO14746 1132 aaKnown RBP16.3■□□□□ 0.2
COL18A1-204ENST00000400337 SCGB1D1O95968 90 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 ALKBH6Q3KRA9 238 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 Q6ZRG5 221 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 OR8D4Q8NGM9 314 aa16.3■□□□□ 0.2
COL18A1-204ENST00000400337 A0A1B0GTH9 108 aa16.29■□□□□ 0.2
COL18A1-204ENST00000400337 ACKR3P25106 362 aa16.29■□□□□ 0.2
COL18A1-204ENST00000400337 NPBWR1P48145 328 aa16.29■□□□□ 0.2
COL18A1-204ENST00000400337 EIF3IQ13347 325 aaKnown RBP16.29■□□□□ 0.2
COL18A1-204ENST00000400337 C9orf152Q5JTZ5 239 aa16.29■□□□□ 0.2
COL18A1-204ENST00000400337 THNSL2Q86YJ6 484 aa16.29■□□□□ 0.2
COL18A1-204ENST00000400337 LFNGQ8NES3 379 aa16.29■□□□□ 0.2
COL18A1-204ENST00000400337 C4orf45Q96LM5 186 aa16.29■□□□□ 0.2
COL18A1-204ENST00000400337 MOGAT1Q96PD6 335 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms