RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 BCL2L15Q5TBC7 163 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 STAC2Q6ZMT1 411 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 MARC2Q969Z3 335 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 PGAM5Q96HS1 289 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 RANGRFQ9HD47 186 aaPredicted RBP10.15□□□□□ -0.78
SKA3-203ENST00000400018 RGS5O15539 181 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 ZNF254O75437 659 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 TACSTD2P09758 323 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 EDN3P14138 238 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 FAHP16930 419 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 MPGP29372 298 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 GNALP38405 381 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 ZNF83P51522 516 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 TEX30Q5JUR7 227 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 MTFR2Q6P444 385 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 NOXA1Q86UR1 476 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 LURAP1LQ8IV03 231 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 OR1F12Q8NHA8 337 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 MCFD2Q8NI22 146 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 LHFPL5Q8TAF8 219 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 BCL2L2Q92843 193 aaPredicted RBP10.15□□□□□ -0.78
SKA3-203ENST00000400018 COMMD3Q9UBI1 195 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 ZNF281Q9Y2X9 895 aa10.15□□□□□ -0.78
SKA3-203ENST00000400018 TENM4Q6N022 2769 aa10.15□□□□□ -0.79
SKA3-203ENST00000400018 ZNF780AO75290 641 aaPredicted RBP10.14□□□□□ -0.79
SKA3-203ENST00000400018 ACKR3P25106 362 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 ZNF133P52736 654 aaPredicted RBP10.14□□□□□ -0.79
SKA3-203ENST00000400018 GABRA6Q16445 453 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 IDNKQ5T6J7 187 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 Q6ZT83 130 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 PRSS45Q7RTY3 260 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 RTN4RL2Q86UN3 420 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 OR5AS1Q8N127 324 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 OR13C3Q8NGS6 347 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 TRMT10AQ8TBZ6 339 aaKnown RBP10.14□□□□□ -0.79
SKA3-203ENST00000400018 ASB5Q8WWX0 329 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 FARS2O95363 451 aaKnown RBP10.14□□□□□ -0.79
SKA3-203ENST00000400018 PTHLHP12272 177 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 CCKARP32238 428 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 DDOSTP39656 456 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 WNT5AP41221 380 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 LSM6P62312 80 aaKnown RBP10.14□□□□□ -0.79
SKA3-203ENST00000400018 ZNF92Q03936 586 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 TLE1Q04724 770 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 ZMYND11Q15326 602 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 GSG1Q2KHT4 349 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 RIPPLY2Q5TAB7 128 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 OR10K2Q6IF99 312 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 VHLLQ6RSH7 139 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 FOXL2NBQ6ZUU3 175 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 SERPINA12Q8IW75 414 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 OR1J2Q8NGS2 313 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 OR13C9Q8NGT0 318 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 OR10Z1Q8NGY1 313 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 KCTD7Q96MP8 289 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 ABCB9Q9NP78 766 aa10.14□□□□□ -0.79
SKA3-203ENST00000400018 A0A1B0GTI1 187 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 ZNF879B4DU55 563 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 HLA-DPB1P04440 258 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 SNRPBP14678 240 aaKnown RBP10.13□□□□□ -0.79
SKA3-203ENST00000400018 STOMP27105 288 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 TNK1Q13470 666 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 KCNMB1Q16558 191 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 RNASE12Q5GAN4 147 aaKnown RBP10.13□□□□□ -0.79
SKA3-203ENST00000400018 TMEM255AQ5JRV8 349 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 LAX1Q8IWV1 398 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 IZUMO1Q8IYV9 350 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 WDR31Q8NA23 367 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 OR4M1Q8NGD0 313 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 ASB17Q8WXJ9 295 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 GCDHQ92947 438 aaPredicted RBP10.13□□□□□ -0.79
SKA3-203ENST00000400018 SGK3Q96BR1 496 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 NPAP1Q9NZP6 1156 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 STARD10Q9Y365 291 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 TIMM10BQ9Y5J6 103 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 TRDV1A0A1B0GX56 115 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 SYT7O43581 403 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 SC5DO75845 299 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 CST2P09228 141 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 ZNF250P15622 560 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 BLVRAP53004 296 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 SNRPD2P62316 118 aaKnown RBP10.13□□□□□ -0.79
SKA3-203ENST00000400018 ACSM1Q08AH1 577 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 GLYATL3Q5SZD4 288 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 ZNF454Q8N9F8 522 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 NEDD4LQ96PU5 975 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 LINC00470Q9BZP3 86 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 LIN7BQ9HAP6 207 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 PLSCR4Q9NRQ2 329 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 PLEKHB1Q9UF11 243 aaPredicted RBP10.13□□□□□ -0.79
SKA3-203ENST00000400018 CACNA1DQ01668 2161 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 APOA1P02647 267 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 GABRA1P14867 456 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 NPR2P20594 1047 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 CRYGSP22914 178 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 AZGP1P25311 298 aaKnown RBP10.13□□□□□ -0.79
SKA3-203ENST00000400018 TAB1Q15750 504 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 CD200R1LQ6Q8B3 271 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 LILRB2Q8N423 598 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 OR6K3Q8NGY3 331 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 516.7 ms