RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ODF4Q2M2E3 257 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 KLBQ86Z14 1044 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR10AC1Q8NH08 325 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GATAD2BQ8WXI9 593 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RGP1Q92546 391 aaPredicted RBP10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MYDGFQ969H8 173 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MRPL48Q96GC5 212 aaKnown RBP10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR5M11Q96RB7 305 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SLC30A2Q9BRI3 323 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RGCCQ9H4X1 137 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CXorf56Q9H5V9 222 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OPA3Q9H6K4 179 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 BEX4Q9NWD9 120 aaPredicted RBP10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 BABAM2Q9NXR7 383 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ARID1AO14497 2285 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PRRC2AP48634 2157 aaKnown RBP10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CCDC168Q8NDH2 2452 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GGT3PA6NGU5 568 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 H3BSH0 61 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ZFPL1O95159 310 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RBMXP38159 391 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MAP2K4P45985 399 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TGM4P49221 684 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ZNF81P51508 661 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GBX2P52951 348 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CDH15P55291 814 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 WNT4P56705 351 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GABARAPL2P60520 117 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CDK5R1Q15078 307 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TMPRSS11AQ6ZMR5 421 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 KRT74Q7RTS7 529 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PRSS48Q7RTY5 328 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ZFP41Q8N8Y5 198 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR51A4Q8NGJ6 313 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR14K1Q8NGZ2 314 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DVL3Q92997 716 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ZDHHC16Q969W1 377 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PERPQ96FX8 193 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 FAM71F1Q96KD3 344 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 VRK1Q99986 396 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 YTHDF1Q9BYJ9 559 aaKnown RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 FGF23Q9GZV9 251 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CGGBP1Q9UFW8 167 aaPredicted RBP10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ZNF391Q9UJN7 358 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PMF1-BGLAPU3KQ54 211 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 V9GYS6 101 aa10.55□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LOC107986453A0A1B0GWG9 222 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LOC390937A0A1W2PQ73 354 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MYL12BO14950 172 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OGG1O15527 345 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SPRY3O43610 288 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DHRS3O75911 302 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 HPXP02790 462 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 HLA-DPB1P04440 258 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CD55P08174 381 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SELEP16581 610 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CFL1P23528 166 aaKnown RBP10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MOGQ16653 247 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DMKNQ6E0U4 476 aaPredicted RBP10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TGIF2LYQ8IUE0 185 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR10AD1Q8NGE0 317 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PGLYRP3Q96LB9 341 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PDCD1LG2Q9BQ51 273 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MS4A5Q9H3V2 200 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CYSLTR2Q9NS75 346 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 NKIRAS2Q9NYR9 191 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GPR160Q9UJ42 338 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RHBDD3Q9Y3P4 386 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
HLA-DQB1-203ENST00000399082 VPS13CQ709C8 3753 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PLSCR5A0PG75 271 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ISG15P05161 165 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 UBCP0CG48 685 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 FAHP16930 419 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CA6P23280 308 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LIPAP38571 399 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DDOSTP39656 456 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ATP5J2P56134 94 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CCL8P80075 99 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MRPL28Q13084 256 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TBCEQ15813 527 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 KCTD21Q4G0X4 260 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CCDC58Q4VC31 144 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RPL22L1Q6P5R6 122 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DNM1P46Q6ZS02 220 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DOK3Q7L591 496 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 COMMD2Q86X83 199 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LRRC75A-AS1Q8N1F1 130 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR2Z1Q8NG97 314 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 UBASH3BQ8TF42 649 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 HPSE2Q8WWQ2 592 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SMIM19Q96E16 107 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ELMOD3Q96FG2 381 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MYCBPQ99417 103 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 FOXC2Q99958 501 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MND1Q9BWT6 205 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CCDC90BQ9GZT6 254 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CXXC4Q9H2H0 198 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms