RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 RCN1Q15293 331 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 SPRNQ5BIV9 151 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 PLEKHG7Q6ZR37 379 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 KCTD20Q7Z5Y7 419 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 MUC20Q8N307 709 aaPredicted RBP12.05□□□□□ -0.48
HDDC2-202ENST00000398153 SPICQ8N5J4 248 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 OR8B12Q8NGG6 310 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 APOL4Q9BPW4 351 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 ADAT1Q9BUB4 502 aaKnown RBP12.05□□□□□ -0.48
HDDC2-202ENST00000398153 LPAR3Q9UBY5 353 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 KCNS2Q9ULS6 477 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 MPC1Q9Y5U8 109 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 SNX5Q9Y5X3 404 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 ZFHX3Q15911 3703 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 INAFM1C9JVW0 142 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 CASQ2O14958 399 aaPredicted RBP12.04□□□□□ -0.48
HDDC2-202ENST00000398153 LMX1BO60663 402 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 ENTPD6O75354 484 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 CRLF1O75462 422 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 SRSF10O75494 262 aaKnown RBP12.04□□□□□ -0.48
HDDC2-202ENST00000398153 MTRF1O75570 445 aaKnown RBP12.04□□□□□ -0.48
HDDC2-202ENST00000398153 CST4P01036 141 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 IGHV2-70P01814 119 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 IRF2P14316 349 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 ANOS1P23352 680 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 GNALP38405 381 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 MAP2K3P46734 347 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 DVL1P1P54792 670 aaPredicted RBP12.04□□□□□ -0.48
HDDC2-202ENST00000398153 BTG1P62324 171 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 IL5RAQ01344 420 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 ZBTB37Q5TC79 503 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 TTC23Q5W5X9 447 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 LRRC28Q86X40 367 aaPredicted RBP12.04□□□□□ -0.48
HDDC2-202ENST00000398153 ENTHD1Q8IYW4 607 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 KLHL36Q8N4N3 616 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 OR11L1Q8NGX0 322 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 UBE2FQ969M7 185 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 MRPL48Q96GC5 212 aaKnown RBP12.04□□□□□ -0.48
HDDC2-202ENST00000398153 SIGLEC11Q96RL6 698 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 ZNF665Q9H7R5 613 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 FN3KRPQ9HA64 309 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 CDC42EP3Q9UKI2 254 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 R4GMQ9 66 aa12.04□□□□□ -0.48
HDDC2-202ENST00000398153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.03□□□□□ -0.482e-12■■■□□ 18.1
HDDC2-202ENST00000398153 A0A1W2PQL4 384 aaPredicted RBP12.03□□□□□ -0.48
HDDC2-202ENST00000398153 METTL15A6NJ78 407 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 ANXA2P2A6NMY6 339 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 DHRS7CA6NNS2 312 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 LOC110117498-PIK3R3F6TDL0 507 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 J3QRE1 110 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 PSMD9O00233 223 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 IGLV3-1P01715 115 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 IGHV2-5P01817 119 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 ZNF16P17020 682 aaPredicted RBP12.03□□□□□ -0.48
HDDC2-202ENST00000398153 HOXB4P17483 251 aaPredicted RBP12.03□□□□□ -0.48
HDDC2-202ENST00000398153 IL2RGP31785 369 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 MDH2P40926 338 aaKnown RBP12.03□□□□□ -0.48
HDDC2-202ENST00000398153 PRSS12P56730 875 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 GFOD2Q3B7J2 385 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 ZNF684Q5T5D7 378 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 AVPI1Q5T686 147 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 LPCAT4Q643R3 524 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 MOGAT3Q86VF5 341 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 ELMOD2Q8IZ81 293 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 CCDC54Q8NEL0 328 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 OR10H4Q8NGA5 316 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 OR8S1Q8NH09 359 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 OR51F2Q8NH61 342 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 RNFT2Q96EX2 444 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 GAL3ST1Q99999 423 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 VCXQ9H320 206 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 TRIM36Q9NQ86 728 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 TREM2Q9NZC2 230 aa12.03□□□□□ -0.48
HDDC2-202ENST00000398153 MRM2Q9UI43 246 aaKnown RBP12.03□□□□□ -0.48
HDDC2-202ENST00000398153 EXOGQ9Y2C4 368 aaKnown RBP12.03□□□□□ -0.48
HDDC2-202ENST00000398153 RPL36Q9Y3U8 105 aaKnown RBP12.03□□□□□ -0.48
HDDC2-202ENST00000398153 ISPDA4D126 451 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 PRR32B1ATL7 298 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 DLGAP1O14490 977 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 WNT9BO14905 357 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 MSMBP08118 114 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 RAB40BQ12829 278 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 IL18R1Q13478 541 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 BCL2L15Q5TBC7 163 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 OGFRL1Q5TC84 451 aaPredicted RBP12.02□□□□□ -0.49
HDDC2-202ENST00000398153 Q6ZSR3 168 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 FAM220AQ7Z4H9 259 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 GLCCI1Q86VQ1 547 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 GALNT4Q8N4A0 578 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 RFLNBQ8N5W9 214 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 ACBD7Q8N6N7 88 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 YIPF7Q8N8F6 280 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 SETD9Q8NE22 299 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 LYZL4Q96KX0 146 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 SOX7Q9BT81 388 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 PAPOLGQ9BWT3 736 aaKnown RBP12.02□□□□□ -0.49
HDDC2-202ENST00000398153 NARFLQ9H6Q4 476 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 G6PC2Q9NQR9 355 aa12.02□□□□□ -0.49
HDDC2-202ENST00000398153 INPP5EQ9NRR6 644 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms