RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 INSL5Q9Y5Q6 135 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 SNX11Q9Y5W9 270 aa5.89□□□□□ -1.47
TM9SF4-202ENST00000398022 KIAA1549LQ6ZVL6 1849 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 A0A0U1RRA0 63 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 SAP18O00422 153 aaKnown RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 TIMM8AO60220 97 aaPredicted RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 FCGR2AP12318 317 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 PMCHP20382 165 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 MMP11P24347 488 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 RFX2P48378 723 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 PRLHRP49683 370 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 OR2B8PP59922 312 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM42Q69YG0 159 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 C22orf42Q6IC83 251 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 C15orf54Q8N8G6 183 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 OR52L2PQ8NGH6 319 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 THAP6Q8TBB0 222 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM163Q8TC26 289 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 TFGQ92734 400 aaPredicted RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 GLYATL1Q969I3 302 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 MOAP1Q96BY2 351 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 SPRTNQ9H040 489 aaPredicted RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 C11orf54Q9H0W9 315 aaPredicted RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 NKX2-4Q9H2Z4 354 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 A4GALTQ9NPC4 353 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF346Q9UL40 294 aaKnown RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 MEMO1Q9Y316 297 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 LSM2Q9Y333 95 aaKnown RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 CSDC2Q9Y534 153 aaKnown RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 DSPPQ9NZW4 1301 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF785A8K8V0 405 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 GNG7O60262 68 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 CER1O95813 267 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 APLNRP35414 380 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 CTSOP43234 321 aaPredicted RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC6A8P48029 635 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 GINS1Q14691 196 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF79Q15937 498 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 ITPRIPL2Q3MIP1 535 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 PLK5Q496M5 336 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 C12orf73Q69YU5 71 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 OLIG3Q7RTU3 272 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 LDLRAD3Q86YD5 345 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 LAS2Q8IYD9 372 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF610Q8N9Z0 462 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 CADM4Q8NFZ8 388 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC26A10Q8NG04 563 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 OR10R2Q8NGX6 335 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 F2RL3Q96RI0 385 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 C1QTNF6Q9BXI9 259 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 MS4A8Q9BY19 250 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 FRYQ5TBA9 3013 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 PRRC2BQ5JSZ5 2229 aaKnown RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 B4DXG7 233 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 RCC1P18754 421 aaPredicted RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 DUSP1P28562 367 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 PPT1P50897 306 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 RIPPLY3P57055 190 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 NKX6-1P78426 367 aaPredicted RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 RAB40BQ12829 278 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 LDLRAD2Q5SZI1 272 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 FAM180AQ6UWF9 173 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 HSD11B1LQ7Z5J1 315 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 NEURL3Q96EH8 262 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 P2RX2Q9UBL9 471 aa5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 ZNF106Q9H2Y7 1883 aaKnown RBP5.88□□□□□ -1.47
TM9SF4-202ENST00000398022 COL4A3Q01955 1670 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 CTDSPLO15194 276 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TOMM40O96008 361 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 PMP2P02689 132 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 HLA-DPB1P04440 258 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 AK4P27144 223 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 BRS3P32247 399 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SOX2P48431 317 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 DOC2BQ14184 412 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 ADAM5Q6NVV9 412 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 KIRREL2Q6UWL6 708 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SIGLEC15Q6ZMC9 328 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 UBE3DQ7Z6J8 389 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 OR4D5Q8NGN0 318 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SLC38A5Q8WUX1 472 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 WDR34Q96EX3 536 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TP53RKQ96S44 253 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 COMMD3Q9UBI1 195 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 VPREB3Q9UKI3 123 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 BPTFQ12830 3046 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 KIF26AQ9ULI4 1882 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 GOLGA4Q13439 2230 aaKnown RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 TMEM129A0AVI4 362 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 UCHL1P09936 223 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 LIPCP11150 499 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 SOX18P35713 384 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 CTSCP53634 463 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 RELBQ01201 579 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 NSDHLQ15738 373 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 GLYR1Q49A26 553 aaPredicted RBP5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 CCSMST1Q4G0I0 132 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 PDZD11Q5EBL8 140 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 NHLRC3Q5JS37 347 aa5.87□□□□□ -1.47
TM9SF4-202ENST00000398022 HENMT1Q5T8I9 393 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms