RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CMBLQ96DG6 245 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 IGLV1-36A0A0B4J1U3 117 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 AGPAT2O15120 278 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 SEMA4FO95754 770 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 IGFBP3P17936 291 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 EIF5AP63241 154 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 PPP1R1AQ13522 171 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 TDGQ13569 410 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 SLC22A6Q4U2R8 563 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 KCTD18Q6PI47 426 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 MAMDC2Q7Z304 686 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 KDM8Q8N371 416 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 ARL6IP6Q8N6S5 226 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 TSLPQ969D9 159 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 RRNAD1Q96FB5 475 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 RNF126Q9BV68 326 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 SLCO5A1Q9H2Y9 848 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 LMAN1LQ9HAT1 526 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 TP53TG5Q9Y2B4 290 aa14.23□□□□□ -0.13
CHMP1A-201ENST00000397901 C5orf51A6NDU8 294 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 C2CD4DB7Z1M9 353 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 IGHV4-34P06331 123 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 IL13RA1P78552 427 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 ROM1Q03395 351 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 GVQW1Q8N7I0 195 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 ZSCAN4Q8NAM6 433 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 OR4D6Q8NGJ1 314 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 ZNF519Q8TB69 540 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 CASTOR1Q8WTX7 329 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 ZNF587Q96SQ5 575 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 CST11Q9H112 138 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 SPEGQ15772 3267 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 LOC101059948A0A1B0GTJ6 334 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 LOC107986453A0A1B0GWG9 222 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 RABIFP47224 123 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 CASP6P55212 293 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 CYCSP99999 105 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 TCEAL6Q6IPX3 200 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 ADAMTS18Q8TE60 1221 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 S100A13Q99584 98 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 NUDT9Q9BW91 350 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 NMES1Q9C002 83 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 TGIF2Q9GZN2 237 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 PARP11Q9NR21 331 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 SOHLH2Q9NX45 425 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 PISDQ9UG56 409 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 ZNF107Q9UII5 783 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 COA3Q9Y2R0 106 aaPredicted RBP14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 TMED7Q9Y3B3 224 aa14.22□□□□□ -0.13
CHMP1A-201ENST00000397901 BLACEA4D250 179 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 DAOP14920 347 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 CD1CP29017 333 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 SULT1A1P50225 295 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 CLINT1Q14677 625 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 ELOCQ15369 112 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 RHEBQ15382 184 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 RNASE10Q5GAN6 216 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 FJX1Q86VR8 437 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 LINC00346Q8IVM7 164 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 PNLDC1Q8NA58 520 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 CHST4Q8NCG5 386 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 FAM46BQ96A09 425 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 OR11A1Q9GZK7 315 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 HHLA2Q9UM44 414 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 SEC16AO15027 2179 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 PCNX3Q9H6A9 2034 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 WIPF3A6NGB9 483 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 IL12BP29460 328 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 SLC6A8P48029 635 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 SULT1A2P50226 295 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 NDUFA6P56556 154 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 RSU1Q15404 277 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 SGCBQ16585 318 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 KCTD9Q7L273 389 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 TRAPPC6BQ86SZ2 158 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 UBAC2Q8NBM4 344 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 OR10D4PQ8NGN7 298 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 OR52N5Q8NH56 324 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 MISP3Q96FF7 219 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 DUSP15Q9H1R2 295 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 OR2S2Q9NQN1 319 aa14.21□□□□□ -0.13
CHMP1A-201ENST00000397901 TRIOO75962 3097 aa14.21□□□□□ -0.14
CHMP1A-201ENST00000397901 C13orf42A0A1B0GVH6 325 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 LDLRAD4O15165 306 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 LRP3O75074 770 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 THEGLP0DJG4 465 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 COX5BP10606 129 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 GP1BBP13224 206 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 FSTP19883 344 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 VAMP1P23763 118 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 OR1D4P47884 311 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 CX3CR1P49238 355 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 FZD2Q14332 565 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 FAHD2BQ6P2I3 314 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 HIST2H3AQ71DI3 136 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 ZDHHC22Q8N966 263 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 OR1J1Q8NGS3 322 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 MRGPRFQ96AM1 343 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 FAHD2AQ96GK7 314 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms