RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TDRD6O60522 2096 aaKnown RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 DCTDP32321 178 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 TRMT12Q53H54 448 aaKnown RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 PAQR6Q6TCH4 344 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 YIPF6Q96EC8 236 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 OR5H8P0DN80 308 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF816Q0VGE8 651 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 UBE3DQ7Z6J8 389 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 CRYGNQ8WXF5 182 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 GSX1Q9H4S2 264 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 KIAA0100Q14667 2235 aaKnown RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 PMS2P1A4D2B8 440 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 IRS1P35568 1242 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 PMP22Q01453 160 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 C17orf78Q8N4C9 275 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 AUNIPQ9H7T9 357 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 CSNK1EP49674 416 aaKnown RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 RPL18Q07020 188 aaKnown RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 THOC3Q96J01 351 aaKnown RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 ISG20L2Q9H9L3 353 aaKnown RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 SLC25A19Q9HC21 320 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 ATP23Q9Y6H3 246 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 MYO7AQ13402 2215 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 ARHGEF17Q96PE2 2063 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 BTNL3Q6UXE8 466 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 RFLNAQ6ZTI6 216 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 TMEM174Q8WUU8 243 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 FAM221AA4D161 298 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 HAAOP46952 286 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 CDK5R1Q15078 307 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 OSR2Q8N2R0 312 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 PHOSPHO2Q8TCD6 241 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 LAT2Q9GZY6 243 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 A0A1W2PNV4 684 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 DSCR3O14972 297 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 EPXP11678 715 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 SMIM21Q3B7S5 101 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 FFAR4Q5NUL3 377 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 OR52N4Q8NGI2 321 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 NRSN2Q9GZP1 204 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 C19orf53Q9UNZ5 99 aaPredicted RBP12.66□□□□□ -0.38
COL4A3-202ENST00000396578 ITGB4P16144 1822 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 DNAJC25-GNG10A0A024R161 153 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 ADAM11O75078 769 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 STAG3L2P0CL84 134 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 RTN4IP1Q8WWV3 396 aaPredicted RBP12.66□□□□□ -0.38
COL4A3-202ENST00000396578 SERPINE3A8MV23 424 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 M0QZ24 198 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 SELENBP1Q13228 472 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 B3GNT9Q6UX72 402 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 KCNE4Q8WWG9 221 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 NAT8BQ9UHF3 227 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 PIKFYVEQ9Y2I7 2098 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 GZMKP49863 264 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 GNG4P50150 75 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 GUK1Q16774 197 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 MS4A6EQ96DS6 147 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 TARM1B6A8C7 271 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF121P58317 390 aaPredicted RBP12.66□□□□□ -0.38
COL4A3-202ENST00000396578 YRDCQ86U90 279 aaKnown RBP12.66□□□□□ -0.38
COL4A3-202ENST00000396578 CMTM3Q96MX0 182 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 CHST6Q9GZX3 395 aa12.66□□□□□ -0.38
COL4A3-202ENST00000396578 BRWD1Q9NSI6 2320 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 A0A1B0GTQ1 180 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 HRO43593 1189 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 SEMG1P04279 462 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 OR5AL1P0C617 328 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 ST8SIA1Q92185 356 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 ACY3Q96HD9 319 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 OXGR1Q96P68 337 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 AKIP1Q9NQ31 210 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 CD22P20273 847 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 SPCS3P61009 180 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 OR5D13Q8NGL4 314 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 SMIM4Q8WVI0 70 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 HS3ST3A1Q9Y663 406 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 ESPL1Q14674 2120 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 DEFB103AP81534 67 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 TRNP1Q6NT89 227 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 TXNIPQ9H3M7 391 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 SIRT3Q9NTG7 399 aaPredicted RBP12.65□□□□□ -0.38
COL4A3-202ENST00000396578 MTCL1Q9Y4B5 1905 aaKnown RBP12.65□□□□□ -0.38
COL4A3-202ENST00000396578 FAM166BA8MTA8 275 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 GYPAP02724 150 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 ABCD3P28288 659 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 RPEL1Q2QD12 228 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 TMEM37Q8WXS4 190 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 EDAQ92838 391 aa12.65□□□□□ -0.38
COL4A3-202ENST00000396578 TNFSF11O14788 317 aa12.65□□□□□ -0.39
COL4A3-202ENST00000396578 CLDN23Q96B33 292 aa12.65□□□□□ -0.39
COL4A3-202ENST00000396578 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.39
COL4A3-202ENST00000396578 DAPP1Q9UN19 280 aa12.65□□□□□ -0.39
COL4A3-202ENST00000396578 IL5P05113 134 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 MEOX1P50221 254 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 CCSMST1Q4G0I0 132 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 AFMIDQ63HM1 303 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 ALKAL1Q6UXT8 129 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms