RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 RBPJQ06330 500 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 PLA2G7Q13093 441 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 BIVMQ86UB2 503 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 ZNF101Q8IZC7 436 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 APOBEC3DQ96AK3 386 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-204ENST00000396548 WBP1Q96G27 269 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 METTL17Q9H7H0 456 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-204ENST00000396548 TMEM138Q9NPI0 162 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 ETAA1Q9NY74 926 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 PIGLQ9Y2B2 252 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 MEMO1Q9Y316 297 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 MTRF1O75570 445 aaKnown RBP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 ZNF35P13682 527 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 FAHP16930 419 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 ZNF20P17024 532 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 RAB3AP20336 220 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 GK2Q14410 553 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 SPANXN2Q5MJ10 180 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 SEZ6L2Q6UXD5 910 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 MRGPRGQ86SM5 289 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 SAMD12Q8N8I0 201 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 SEMA6DQ8NFY4 1073 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 UBASH3BQ8TF42 649 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 PP6455Q8WZ26 134 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 ABCG5Q9H222 651 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 STARD10Q9Y365 291 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 SMG1Q96Q15 3661 aaKnown RBP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 SVILO95425 2214 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 APOA1P02647 267 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 PRF1P14222 555 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 APLNRP35414 380 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 UBE2NP61088 152 aaKnown RBP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 UBE2NLQ5JXB2 153 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 COMMD2Q86X83 199 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 SNX29P2Q8IUI4 249 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 AKAP1Q92667 903 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 NKX3-1Q99801 234 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 TBCCD1Q9NVR7 557 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 ETV7Q9Y603 341 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 J3QW42 95 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 AGFG2O95081 481 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 CA7P43166 264 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 QRFPP83859 136 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 ZBTB37Q5TC79 503 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 GLT8D1Q68CQ7 371 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 ZGRF1Q86YA3 2104 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 OR4D6Q8NGJ1 314 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 OR13C9Q8NGT0 318 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 ITFG2Q969R8 447 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 FOXRED1Q96CU9 486 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 DIRAS2Q96HU8 199 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 UQCC2Q9BRT2 126 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 CNTD2Q9H8S5 307 aa10.98□□□□□ -0.65
TRIM39-204ENST00000396548 CGGBP1Q9UFW8 167 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-204ENST00000396548 RTTNQ86VV8 2226 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 GNALP38405 381 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 C3orf36Q3SXR2 165 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 XKRXQ6PP77 449 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 OR4M1Q8NGD0 313 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 CEP19Q96LK0 163 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
TRIM39-204ENST00000396548 AMDHD2Q9Y303 409 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 UPK1BO75841 260 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 CCKARP32238 428 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 P2RY14Q15391 338 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 TBC1D28Q2M2D7 210 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 C1QTNF12Q5T7M4 302 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 CMTM4Q8IZR5 234 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 OR6M1Q8NGM8 313 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 S100PBPQ96BU1 408 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 CRIM1Q9NZV1 1036 aa10.97□□□□□ -0.65
TRIM39-204ENST00000396548 PKD1L2Q7Z442 2459 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 FABP12A6NFH5 140 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 KALRNO60229 2985 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 SMPD2O60906 423 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 HTR2CP28335 458 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 MAP2K3P46734 347 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 RIPPLY1Q0D2K3 151 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 RAB11BQ15907 218 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 C2orf76Q3KRA6 126 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 C22orf34Q6ZV56 151 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 RFPL4BQ6ZWI9 263 aa10.96□□□□□ -0.65
TRIM39-204ENST00000396548 RELNP78509 3460 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 IGHV1-18A0A0C4DH31 117 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 GMDSO60547 372 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 BMP5P22003 454 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 CCNOP22674 350 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 PRSS12P56730 875 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 OR51D1Q8NGF3 324 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 FAM3DQ96BQ1 224 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 SORCS2Q96PQ0 1159 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 CCDC32Q9BV29 185 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 ELOVL5Q9NYP7 299 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 ADAM30Q9UKF2 790 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 TMEM272A0A1B0GTI8 110 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 ERCC1P07992 297 aaPredicted RBP10.96□□□□□ -0.66
TRIM39-204ENST00000396548 HLXQ14774 488 aaPredicted RBP10.96□□□□□ -0.66
TRIM39-204ENST00000396548 BAK1Q16611 211 aa10.96□□□□□ -0.66
TRIM39-204ENST00000396548 ZNF181Q2M3W8 571 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms