RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 NOXO1Q8NFA2 376 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 POC1BQ8TC44 478 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 STT3BQ8TCJ2 826 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 PRR13Q9NZ81 148 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 A0A0B4J2A0 478 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 MSGN1A6NI15 193 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 ADAP1O75689 374 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SFT2D2O95562 160 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 MYF5P13349 255 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 ZNF121P58317 390 aaPredicted RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SGCAQ16586 387 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 C10orf91Q5T1B1 145 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 ANKRD37Q7Z713 158 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 LDLRAD3Q86YD5 345 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 ARMC10Q8N2F6 343 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SSC4DQ8WTU2 575 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 TMEM41AQ96HV5 264 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 TGIF2Q9GZN2 237 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 PNRC2Q9NPJ4 139 aaKnown RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 GPR84Q9NQS5 396 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 HPF1Q9NWY4 346 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SHPKQ9UHJ6 478 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SPAG17Q6Q759 2223 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 MFNGO00587 321 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 LYL1P12980 280 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 CLRN1P58418 232 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 CYCSP99999 105 aaKnown RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 PLPPR5Q32ZL2 321 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 PLEKHN1Q494U1 663 aaPredicted RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 PEG10Q86TG7 708 aaKnown RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 KCNG3Q8TAE7 436 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 NUBPLQ8TB37 319 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 OCSTAMPQ9BR26 566 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SEC61A2Q9H9S3 476 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 FLVCR1Q9Y5Y0 555 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 RALGAPA1Q6GYQ0 2036 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 PIAS2O75928 621 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 FAM157CP0CG43 387 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 FLI1Q01543 452 aaPredicted RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SLC9A3R2Q15599 337 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SMAD2Q15796 467 aaKnown RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 ACTBL2Q562R1 376 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SLC25A53Q5H9E4 307 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 TMEM71Q6P5X7 295 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 COMMD2Q86X83 199 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 SVBPQ8N300 66 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 TMED6Q8WW62 240 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 MICU1Q9BPX6 476 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 RTBDNQ9BSG5 229 aaPredicted RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 ADAT1Q9BUB4 502 aaKnown RBP13.88□□□□□ -0.19
HOXA3-202ENST00000396352 TMEM59Q9BXS4 323 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 RAB18Q9NP72 206 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 PRELID3BQ9Y3B1 194 aa13.88□□□□□ -0.19
HOXA3-202ENST00000396352 PI3P19957 117 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 CCL1P22362 96 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 ANKRD55Q3KP44 614 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 CCDC157Q569K6 752 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 NKAPLQ5M9Q1 402 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 OR4A4PQ8NGN8 299 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 ARHGAP5-AS1Q96IT6 56 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 CDC6Q99741 560 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 OR5AC2Q9NZP5 309 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 ZNF814B7Z6K7 855 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 TRAF3IP2O43734 574 aaPredicted RBP13.87□□□□□ -0.19
HOXA3-202ENST00000396352 GIMD1P0DJR0 217 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 HFEQ30201 348 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 TMEM88Q6PEY1 159 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 UEVLDQ8IX04 471 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 OR2AJ1Q8NGZ0 328 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 RNF141Q8WVD5 230 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 WNT2BQ93097 391 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 ASH2LQ9UBL3 628 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 POLR1DQ9Y2S0 133 aa13.87□□□□□ -0.19
HOXA3-202ENST00000396352 IGKV1-9A0A0C4DH69 117 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 RER1O15258 196 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 IGHG1P01857 330 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 OPN1LWP04000 364 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 PTGDSP41222 190 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 LBX1P52954 281 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 AADACL3Q5VUY0 350 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 OR13G1Q8NGZ3 307 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 FAM71F1Q96KD3 344 aaPredicted RBP13.86□□□□□ -0.19
HOXA3-202ENST00000396352 MRGPRX4Q96LA9 322 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 CEP192Q8TEP8 1941 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 FPR2P25090 351 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 ZNF41P51814 821 aaPredicted RBP13.86□□□□□ -0.19
HOXA3-202ENST00000396352 GABREP78334 506 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 SCRN3Q0VDG4 424 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 AIMP2Q13155 320 aaKnown RBP13.86□□□□□ -0.19
HOXA3-202ENST00000396352 MST1LQ2TV78 715 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 PRSS54Q6PEW0 395 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 SLC25A47Q6Q0C1 308 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 CRIP3Q6Q6R5 217 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 SLC38A9Q8NBW4 561 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 ARL11Q969Q4 196 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 KLRF1Q9NZS2 232 aa13.86□□□□□ -0.19
HOXA3-202ENST00000396352 ZNF629Q9UEG4 869 aaPredicted RBP13.86□□□□□ -0.19
HOXA3-202ENST00000396352 CARHSP1Q9Y2V2 147 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms