RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZNF266Q14584 549 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SPATC1Q76KD6 591 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR11L1Q8NGX0 322 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CD300LFQ8TDQ1 290 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 DHRS9Q9BPW9 319 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 NOX3Q9HBY0 568 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 POLE4Q9NR33 117 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 UBQLN2Q9UHD9 624 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SLC2A5P22732 501 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CD96P40200 585 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 DBPQ10586 325 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FUT5Q11128 374 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 HES5Q5TA89 166 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PLCXD3Q63HM9 321 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM57BQ71RH2 274 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR1M1Q8NGA1 313 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PBOV1Q9GZY1 135 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MED20Q9H944 212 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MRPS28Q9Y2Q9 187 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PCYT1BQ9Y5K3 369 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 AKR7A2O43488 359 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SELENOFO60613 162 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ALDOBP05062 364 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SPIN3Q5JUX0 258 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 INO80CQ6PI98 192 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 Q7L0L9 218 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR13G1Q8NGZ3 307 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TSPAN10Q9H1Z9 355 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PROCRQ9UNN8 238 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF724A8MTY0 619 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PIP5K1CO60331 668 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 DTYMKP23919 212 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 BLVRBP30043 206 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CDKN2AP42771 156 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 RPS25P62851 125 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 DESI1Q6ICB0 168 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SLC16A12Q6ZSM3 486 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR6K3Q8NGY3 331 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 BOD1Q96IK1 185 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ALKBH3Q96Q83 286 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SLC25A31Q9H0C2 315 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MTFP1Q9UDX5 166 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MYO15AQ9UKN7 3530 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 IGHV3-20A0A0C4DH32 117 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ACTL6BO94805 426 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 HEXAP06865 529 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CCL4P13236 92 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TPT1P13693 172 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CEACAM16Q2WEN9 425 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 UTS2BQ765I0 119 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 GLRX5Q86SX6 157 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 YRDCQ86U90 279 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 KDM8Q8N371 416 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TCTEX1D1Q8N7M0 179 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ZBTB8BQ8NAP8 495 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PLPP7Q8NBV4 271 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 BEST4Q8NFU0 473 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PRR14Q9BWN1 585 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TP63Q9H3D4 680 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PIGLQ9Y2B2 252 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MAST4O15021 2626 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TAS2R20P59543 309 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PAN3Q58A45 887 aaKnown RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 C1orf162Q8NEQ5 155 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 OR8D4Q8NGM9 314 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TERB2Q8NHR7 220 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SLC6A7Q99884 636 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PLEKHF2Q9H8W4 249 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM74BQ9NUR3 256 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TRAV6A0A075B6T7 132 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PPP3CBP16298 524 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 AKR1C2P52895 323 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 KISS1Q15726 138 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 MPV17LQ2QL34 196 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PLA1AQ53H76 456 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 C10orf128Q5T292 105 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 C17orf78Q8N4C9 275 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF431Q8TF32 576 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 GAL3ST1Q99999 423 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PPA2Q9H2U2 334 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 EMC7Q9NPA0 242 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 CA10Q9NS85 328 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 DYSFO75923 2080 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NUDT19A8MXV4 375 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 CXCL13O43927 109 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ALX3O95076 343 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ALDH3B1P43353 468 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 RAB1AP62820 205 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SPOCK1Q08629 439 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 MPPED2Q15777 294 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ESCO2Q56NI9 601 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 FCRLBQ6BAA4 426 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 PXT1Q8NFP0 134 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 ASB10Q8WXI3 467 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 NAA50Q9GZZ1 169 aaKnown RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 GALNT9Q9HCQ5 603 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 TAS2R5Q9NYW4 299 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 MGAT4CQ9UBM8 478 aa3.01□□□□□ -1.93
VPS13C-203ENST00000395896 F5H0A9 414 aaPredicted RBP3.01□□□□□ -1.93
VPS13C-203ENST00000395896 SPINT2O43291 252 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms