RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CSNK2A1P68400 391 aaPredicted RBP12.29□□□□□ -0.44
SNCA-204ENST00000394989 RSPO1Q2MKA7 263 aaPredicted RBP12.29□□□□□ -0.44
SNCA-204ENST00000394989 FAM57BQ71RH2 274 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 GGNQ86UU5 652 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 OR5AS1Q8N127 324 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 GALNT16Q8N428 558 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 SLC22A24Q8N4F4 322 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 PSMF1Q92530 271 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 NKD1Q969G9 470 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 UQCC2Q9BRT2 126 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 REG4Q9BYZ8 158 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 NELFAQ9H3P2 528 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 DOCK10Q96BY6 2186 aa12.29□□□□□ -0.44
SNCA-204ENST00000394989 A0A0A6YYH2 397 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 A6NJ64 397 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 HPP00738 406 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 MSR1P21757 451 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 CCL1P22362 96 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 ACTBP60709 375 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 ACTG1P63261 375 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 SSPNQ14714 243 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 ACER2Q5QJU3 275 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 OR10Z1Q8NGY1 313 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 AQP3Q92482 292 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 ZNF775Q96BV0 537 aaPredicted RBP12.28□□□□□ -0.44
SNCA-204ENST00000394989 FAM71F1Q96KD3 344 aaPredicted RBP12.28□□□□□ -0.44
SNCA-204ENST00000394989 FARSAQ9Y285 508 aaKnown RBP12.28□□□□□ -0.44
SNCA-204ENST00000394989 CREBL2O60519 120 aaPredicted RBP12.28□□□□□ -0.44
SNCA-204ENST00000394989 GLAP06280 429 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 COMMD2Q86X83 199 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 BEST3Q8N1M1 668 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 LRRC18Q8N456 261 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 SPICQ8N5J4 248 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 C12orf57Q99622 126 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 ADAT1Q9BUB4 502 aaKnown RBP12.28□□□□□ -0.44
SNCA-204ENST00000394989 SCPEP1Q9HB40 452 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 P4HTMQ9NXG6 502 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 FOXJ2Q9P0K8 574 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 MFSD2BA6NFX1 497 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 SNRPGP15A8MWD9 76 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 F10P00742 488 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 P04436 131 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 CTSSP25774 331 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 SRD5A2P31213 254 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 LYZL4Q96KX0 146 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 C1orf147Q96MC9 270 aaPredicted RBP12.28□□□□□ -0.44
SNCA-204ENST00000394989 TAAR9Q96RI9 348 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 TINAGL1Q9GZM7 467 aaPredicted RBP12.28□□□□□ -0.44
SNCA-204ENST00000394989 CHST6Q9GZX3 395 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 PTTG3PQ9NZH4 202 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 RAB22AQ9UL26 194 aa12.28□□□□□ -0.44
SNCA-204ENST00000394989 RTTNQ86VV8 2226 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 PINLYPA6NC86 204 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 OR5H15A6NDH6 313 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 ZNF98A6NK75 572 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 M0QYG6 137 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 BPNT1O95861 308 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 ZNF93P35789 620 aaPredicted RBP12.27□□□□□ -0.44
SNCA-204ENST00000394989 SUCLG1P53597 346 aaKnown RBP12.27□□□□□ -0.44
SNCA-204ENST00000394989 DMRTC1Q5HYR2 192 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 ZNF283Q8N7M2 679 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 TMEM229BQ8NBD8 167 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 C2CD4CQ8TF44 421 aa12.27□□□□□ -0.44
SNCA-204ENST00000394989 NAA11Q9BSU3 229 aaPredicted RBP12.27□□□□□ -0.44
SNCA-204ENST00000394989 IGLV3-1P01715 115 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 CD59P13987 128 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 ZNF20P17024 532 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.45
SNCA-204ENST00000394989 TAS2R19P59542 299 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 GRB2P62993 217 aaKnown RBP12.27□□□□□ -0.45
SNCA-204ENST00000394989 HIST1H3AP68431 136 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 NHLRC3Q5JS37 347 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 HIST2H3PS2Q5TEC6 136 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 HIST2H3AQ71DI3 136 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 ANGPTL5Q86XS5 388 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 OR4S1Q8NGB4 309 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 CYYR1Q96J86 154 aa12.27□□□□□ -0.45
SNCA-204ENST00000394989 RBM24Q9BX46 236 aaKnown RBP12.27□□□□□ -0.45
SNCA-204ENST00000394989 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 IGKV1-9A0A0C4DH69 117 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 CDX4O14627 284 aaPredicted RBP12.26□□□□□ -0.45
SNCA-204ENST00000394989 DHHO43323 396 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 ZNF735P0CB33 412 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 CLDN15P56746 228 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 RAC3P60763 192 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 RSPO4Q2I0M5 234 aaPredicted RBP12.26□□□□□ -0.45
SNCA-204ENST00000394989 BEX5Q5H9J7 111 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 PLA2G2CQ5R387 149 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 CRIP3Q6Q6R5 217 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 ZFP82Q8N141 532 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 OR14L1PQ8NHC6 308 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 SSC4DQ8WTU2 575 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 LRRC46Q96FV0 321 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 ZPBPQ9BS86 351 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 TMEM14DPA8MWL7 114 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 RLN1P04808 185 aa12.26□□□□□ -0.45
SNCA-204ENST00000394989 ITGB2P05107 769 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms