RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ZFP62Q8NB50 900 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 OR2I1PQ8NGU4 316 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 MOB3AQ96BX8 217 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 TVP23CQ96ET8 276 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CMTM3Q96MX0 182 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CDX2Q99626 313 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 PRRX2Q99811 253 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 COX7A2P2O60397 106 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CYC1P08574 325 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 GIPP09681 153 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 THBS4P35443 961 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CDK5R1Q15078 307 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 TOR2AQ5JU69 321 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 DRAM2Q6UX65 266 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 A0A0B4J203 849 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 LRP3O75074 770 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 SEMG1P04279 462 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 MGMTP16455 207 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 BAMBIQ13145 260 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 BTNL8Q6UX41 500 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 HIST2H3AQ71DI3 136 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 SLC36A1Q7Z2H8 476 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 SPNS2Q8IVW8 549 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 OR4D9Q8NGE8 314 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 GPX8Q8TED1 209 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 DDOQ99489 341 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CDCA4Q9BXL8 241 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 IKZF5Q9H5V7 419 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 IGHV1OR21-1A0A087WYE8 117 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CXorf51AA0A1B0GTR3 108 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CYTIPO60759 359 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 GPX5O75715 221 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 PI3P19957 117 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 GNG10P50151 68 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 HAGHQ16775 308 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 RBPMSQ93062 196 aaKnown RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 GNPNAT1Q96EK6 184 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 ATP6V1G2-DDX39BF2Z307 99 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 COL9A1P20849 921 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 PIGPP57054 158 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 SRSF5Q13243 272 aaKnown RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 ACER2Q5QJU3 275 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 RPL7L1Q6DKI1 246 aaKnown RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 ERGIC1Q969X5 290 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 CIB3Q96Q77 187 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 TNFRSF12AQ9NP84 129 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 NHSL1Q5SYE7 1610 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 URB1O60287 2271 aaKnown RBP9.34□□□□□ -0.91
COL4A6-203ENST00000394872 TMEM30CPA0ZSE6 113 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 ARRDC5A6NEK1 342 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 EPHA8P29322 1005 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-203ENST00000394872 OR5I1Q13606 314 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 STUMQ69YW2 141 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 LCN15Q6UWW0 184 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 OR10V1Q8NGI7 309 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 FBXW5Q969U6 566 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 DHRS9Q9BPW9 319 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 C19orf43Q9BQ61 176 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 SLC35D1Q9NTN3 355 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF835Q9Y2P0 537 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 KCNE3Q9Y6H6 103 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 TNFSF14O43557 240 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 CDC14BO60729 498 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 JTBO76095 146 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 OR5H8P0DN80 308 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 HFEQ30201 348 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 FAAP20Q6NZ36 180 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 Q7L0L9 218 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 NTN4Q9HB63 628 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 GP2P55259 537 aaKnown RBP9.34□□□□□ -0.91
COL4A6-203ENST00000394872 SNRPNP63162 240 aaKnown RBP9.34□□□□□ -0.91
COL4A6-203ENST00000394872 HTRA4P83105 476 aaPredicted RBP9.34□□□□□ -0.91
COL4A6-203ENST00000394872 FABP5Q01469 135 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 MICBQ29980 383 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 PLAC9Q5JTB6 97 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 ZNRF4Q8WWF5 429 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 HES4Q9HCC6 221 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 LAMP3Q9UQV4 416 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 IFITM5A6NNB3 132 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 GOSR1O95249 250 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF117Q03924 483 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 PRSS36Q5K4E3 855 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 PTOV1Q86YD1 416 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 ADPRHL1Q8NDY3 354 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 OR2G2Q8NGZ5 317 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 OR2T6Q8NHC8 308 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 TCRBV5S2A0A599 114 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF785A8K8V0 405 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 PRDX4Q13162 271 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 TGIF2Q9GZN2 237 aa9.34□□□□□ -0.91
COL4A6-203ENST00000394872 XKRY2A2RUG3 117 aa9.33□□□□□ -0.92
COL4A6-203ENST00000394872 ICMTO60725 284 aa9.33□□□□□ -0.92
COL4A6-203ENST00000394872 LALBAP00709 142 aa9.33□□□□□ -0.92
COL4A6-203ENST00000394872 CISD3P0C7P0 127 aa9.33□□□□□ -0.92
COL4A6-203ENST00000394872 CTGFP29279 349 aa9.33□□□□□ -0.92
COL4A6-203ENST00000394872 NECAP1Q8NC96 275 aa9.33□□□□□ -0.92
COL4A6-203ENST00000394872 POM121L2Q96KW2 1035 aa9.33□□□□□ -0.92
COL4A6-203ENST00000394872 PRDM7Q9NQW5 492 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms