RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 NR2C1P13056 603 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 FHL1Q13642 323 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 AVPI1Q5T686 147 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 P4HA3Q7Z4N8 544 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 LIN37Q96GY3 246 aaPredicted RBP14.38□□□□□ -0.11
PCDH1-203ENST00000394536 ULBP2Q9BZM5 246 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 PIGLQ9Y2B2 252 aa14.38□□□□□ -0.11
PCDH1-203ENST00000394536 ALPK3Q96L96 1907 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 RANBP2P49792 3224 aaKnown RBP14.37□□□□□ -0.11
PCDH1-203ENST00000394536 XRCC2O43543 280 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 SGCEO43556 437 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 ITGB2P05107 769 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 GP1BAP07359 652 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 CD27P26842 260 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 TAS2R46P59540 309 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 PDCD1Q15116 288 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 PCK2Q16822 640 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 BRICD5Q6PL45 260 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 TMEM104Q8NE00 496 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 TNFSF18Q9UNG2 199 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 PUS1Q9Y606 427 aaKnown RBP eCLIP14.37□□□□□ -0.11
PCDH1-203ENST00000394536 PHF3Q92576 2039 aaKnown RBP14.37□□□□□ -0.11
PCDH1-203ENST00000394536 BPNT1O95861 308 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 DBHP09172 617 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 BCKDHBP21953 392 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 CPT2P23786 658 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 CLINT1Q14677 625 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 C9orf135Q5VTT2 229 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 C5orf46Q6UWT4 87 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 SLC26A10Q8NG04 563 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 SLC25A28Q96A46 364 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 RHOFQ9HBH0 211 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 GPR173Q9NS66 373 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 CACNA1DQ01668 2161 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 OR7C1O76099 320 aaPredicted RBP14.37□□□□□ -0.11
PCDH1-203ENST00000394536 DUS4LO95620 317 aaKnown RBP14.37□□□□□ -0.11
PCDH1-203ENST00000394536 HPP00738 406 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 CRHP06850 196 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 MFAP5Q13361 173 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 PPA1Q15181 289 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 OVCH2Q7RTZ1 564 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 CPEB2Q7Z5Q1 589 aaKnown RBP14.37□□□□□ -0.11
PCDH1-203ENST00000394536 OR2I1PQ8NGU4 316 aa14.37□□□□□ -0.11
PCDH1-203ENST00000394536 FCGR2CP31995 323 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 CCR5P51681 352 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 Q6ZRG5 221 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 SLC25A42Q86VD7 318 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 DOCK8Q8NF50 2099 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 HSPB6O14558 160 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 NXPH3O95157 252 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 TXNDC12O95881 172 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 F10P00742 488 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 FGF2P09038 288 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 ZNF16P17020 682 aaPredicted RBP14.36□□□□□ -0.11
PCDH1-203ENST00000394536 CTRB1P17538 263 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 CTRB2Q6GPI1 263 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 OR13C8Q8NGS7 320 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 SHARPINQ9H0F6 387 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 ALX4Q9H161 411 aaPredicted RBP14.36□□□□□ -0.11
PCDH1-203ENST00000394536 C1orf123Q9NWV4 160 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 EPOPA6NHQ4 379 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 RAB27BO00194 218 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 ACY1Q03154 408 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 MISPQ8IVT2 679 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 C20orf196Q8IYI0 205 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 PIGCQ92535 297 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 SRPK3Q9UPE1 567 aa14.36□□□□□ -0.11
PCDH1-203ENST00000394536 RBMXL2O75526 392 aaKnown RBP14.35□□□□□ -0.11
PCDH1-203ENST00000394536 MST1P26927 711 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 MICBQ29980 383 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 RPL7L1Q6DKI1 246 aaKnown RBP14.35□□□□□ -0.11
PCDH1-203ENST00000394536 FBXW12Q6X9E4 464 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 PGAP1Q75T13 922 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 BMPERQ8N8U9 685 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ZDHHC22Q8N966 263 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 OR5L1Q8NGL2 311 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ADAM19Q9H013 955 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 CHRDQ9H2X0 955 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 WIF1Q9Y5W5 379 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 IGLV1-36A0A0B4J1U3 117 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 RPL12P30050 165 aaKnown RBP14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ASCL1P50553 236 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ACTBL2Q562R1 376 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ZNF529Q6P280 563 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 CLEC18BQ6UXF7 455 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 PUSL1Q8N0Z8 303 aaKnown RBP14.35□□□□□ -0.11
PCDH1-203ENST00000394536 OR10G3Q8NGC4 313 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 FAM213BQ8TBF2 198 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ZNF721Q8TF20 911 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 MITD1Q8WV92 249 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 SPTSSAQ969W0 71 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 AKR1E2Q96JD6 320 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 SLC7A11Q9UPY5 501 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 FBXO7Q9Y3I1 522 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 FLVCR1Q9Y5Y0 555 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 DDAH2O95865 285 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 HIST1H1DP16402 221 aaKnown RBP14.35□□□□□ -0.11
PCDH1-203ENST00000394536 THEM4Q5T1C6 240 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ALKBH2Q6NS38 261 aa14.35□□□□□ -0.11
PCDH1-203ENST00000394536 ESX1Q8N693 406 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms