RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 OR1D5P58170 312 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 ZPBPQ9BS86 351 aa12.24□□□□□ -0.45
USP49-203ENST00000394253 SALL3Q9BXA9 1300 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 COCHO43405 550 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 CST4P01036 141 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 IRS1P35568 1242 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 RGRP47804 291 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 LMAN2Q12907 356 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 PNLIPRP3Q17RR3 467 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 FAM71CQ8NEG0 241 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 IL17FQ96PD4 163 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 PSG11Q9UQ72 335 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 A0A1W2PN81 502 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 ARRB2P32121 409 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 CHRNA7P36544 502 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 OR5M10Q6IEU7 315 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 TMEM183AQ8IXX5 376 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 OR6C3Q9NZP0 311 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 IGSF23A1L1A6 192 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 PIPP12273 146 aaPredicted RBP12.23□□□□□ -0.45
USP49-203ENST00000394253 LEMD1Q68G75 181 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 CTSFQ9UBX1 484 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 IAPPP10997 89 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 PTGFRP43088 359 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 KIR2DS2P43631 304 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 CD99L2Q8TCZ2 262 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 NEURL3Q96EH8 262 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 SFXN1Q9H9B4 322 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 DUSP13Q9UII6 198 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 LIPGQ9Y5X9 500 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 DHRS7CA6NNS2 312 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 SLC35E2P0CK97 266 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 SMPD1P17405 629 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 FOXK2Q01167 660 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 SMN1Q16637 294 aaKnown RBP12.23□□□□□ -0.45
USP49-203ENST00000394253 C11orf87Q6NUJ2 197 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 TBC1D26Q86UD7 250 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 TGIF2LXQ8IUE1 241 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 NAT6Q93015 286 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 SMIM19Q96E16 107 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 CPPED1Q9BRF8 314 aaPredicted RBP12.23□□□□□ -0.45
USP49-203ENST00000394253 HSD3B7Q9H2F3 369 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 SIRT7Q9NRC8 400 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 FUCA1P04066 466 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 LEXMQ3ZCV2 418 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 ZNF516Q92618 1163 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 ZNF426Q9BUY5 554 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 IKZF4Q9H2S9 585 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 DUSP21Q9H596 190 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 THYN1Q9P016 225 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 ARR3P36575 388 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 DLK1P80370 383 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 WDR31Q8NA23 367 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 SORT1Q99523 831 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 A4GALTQ9NPC4 353 aa12.23□□□□□ -0.45
USP49-203ENST00000394253 NID2Q14112 1375 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 ERVS71-1P61550 626 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 USP53Q70EK8 1073 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 FAM26EQ8N5C1 309 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 FBXO27Q8NI29 283 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 CA5BP1Q8WTZ4 195 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 ANGPTL4Q9BY76 406 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 TXLNGYQ9BZA5 131 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 GPR75O95800 540 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 ACP1P24666 158 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 CLDN18P56856 261 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 AESQ08117 197 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 FOXO1Q12778 655 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 PERPQ96FX8 193 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 RAB40CQ96S21 281 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 GAL3ST2Q9H3Q3 398 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 MAP1LC3B2A6NCE7 125 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 BCAT2O15382 392 aaPredicted RBP12.22□□□□□ -0.45
USP49-203ENST00000394253 SEMA4FO95754 770 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 GLIS1Q8NBF1 620 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 MAP1LC3BQ9GZQ8 125 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 SRD5A3Q9H8P0 318 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 CACNG4Q9UBN1 327 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 COL5A2P05997 1499 aaPredicted RBP12.22□□□□□ -0.45
USP49-203ENST00000394253 SERPINE3A8MV23 424 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 SOX15O60248 233 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 FGF2P09038 288 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 SEMA3BQ13214 749 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 OR2I1PQ8NGU4 316 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 TNCP24821 2201 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 RAB29O14966 203 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 MBTPS2O43462 519 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 DAPP51397 102 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 WDR89Q96FK6 387 aaPredicted RBP12.22□□□□□ -0.45
USP49-203ENST00000394253 A0A1W2PPC4 97 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 A6NL46 340 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 EPXP11678 715 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
USP49-203ENST00000394253 C19orf57Q0VDD7 668 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 DEFB115Q30KQ5 88 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 OR13G1Q8NGZ3 307 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 OR2W5A6NFC9 320 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms