RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 CLRN3Q8NCR9 226 aa12.33□□□□□ -0.44
GAPVD1-205ENST00000394084 NOXO1Q8NFA2 376 aa12.33□□□□□ -0.44
GAPVD1-205ENST00000394084 TMEM230Q96A57 120 aa12.33□□□□□ -0.44
GAPVD1-205ENST00000394084 FAHD2AQ96GK7 314 aa12.33□□□□□ -0.44
GAPVD1-205ENST00000394084 TMEM231Q9H6L2 316 aa12.33□□□□□ -0.44
GAPVD1-205ENST00000394084 PCDHB16Q9NRJ7 776 aa12.33□□□□□ -0.44
GAPVD1-205ENST00000394084 SDHAF3Q9NRP4 125 aa12.33□□□□□ -0.44
GAPVD1-205ENST00000394084 MSGN1A6NI15 193 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 IGHG1P01857 330 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 GABREP78334 506 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 SRSF3P84103 164 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 GUCA2BQ16661 112 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 THEM4Q5T1C6 240 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF529Q6P280 563 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 TMPRSS9Q7Z410 1059 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 LIN37Q96GY3 246 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 C1orf147Q96MC9 270 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 OR2S2Q9NQN1 319 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 DBX1A6NMT0 343 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 WDPCPO95876 746 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 CHRM2P08172 466 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 PGA4P0DJD7 388 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 PGA3P0DJD8 388 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 CX3CR1P49238 355 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 SGCAQ16586 387 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 TMEM71Q6P5X7 295 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 CLEC18BQ6UXF7 455 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 KLHL13Q9P2N7 655 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 ABCD4O14678 606 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 SCGNO76038 276 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 ATG12O94817 140 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 AMY2BP19961 511 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 DHPSP49366 369 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 TAS2R31P59538 309 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 AIMP2Q13155 320 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 SMAD4Q13485 552 aaKnown RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 RSPO4Q2I0M5 234 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 PLPPR5Q32ZL2 321 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 PLEKHN1Q494U1 663 aaPredicted RBP12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 TMEM128Q5BJH2 165 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 NAA40Q86UY6 237 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 KCNG3Q8TAE7 436 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 OR5AC2Q9NZP5 309 aa12.32□□□□□ -0.44
GAPVD1-205ENST00000394084 CFAP54Q96N23 3096 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 TMEM218A2RU14 115 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 E9PLN8 166 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 OR2J2O76002 312 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 ACTL6AO96019 429 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 F12P00748 615 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 QDPRP09417 244 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 TPT1P13693 172 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 GLB1P16278 677 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF17P17021 662 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 SUMO3P55854 103 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 NKAIN1Q4KMZ8 207 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 NKAPLQ5M9Q1 402 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 BAP18Q8IXM2 172 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 PUSL1Q8N0Z8 303 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 OR5H2Q8NGV7 314 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 GPR132Q9UNW8 380 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 TRAF3IP2O43734 574 aaPredicted RBP12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 TBPP20226 339 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 IL32P24001 234 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 METTL8Q9H825 291 aaKnown RBP12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 GSKIPQ9P0R6 139 aa12.31□□□□□ -0.44
GAPVD1-205ENST00000394084 TEX13DA0A0J9YY54 714 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 A0A1W2PNV4 684 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 ANKRD55Q3KP44 614 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 C1QL2Q7Z5L3 287 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 OR51T1Q8NGJ9 327 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 OR51F2Q8NH61 342 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 SAV1Q9H4B6 383 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 SRPK3Q9UPE1 567 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 FLVCR1Q9Y5Y0 555 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 SFT2D2O95562 160 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 GSTP1P09211 210 aaKnown RBP12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 GLRA1P23415 457 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 OR3A2P47893 321 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 GSK3AP49840 483 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 TMEM176BQ3YBM2 270 aaPredicted RBP12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 PRAMEF20Q5VT98 475 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 RHBDD2Q6NTF9 364 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 ZNF585AQ6P3V2 769 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 GALNTL5Q7Z4T8 443 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 ESX1Q8N693 406 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 OR13G1Q8NGZ3 307 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 OR10C1Q96KK4 312 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 MRGPRX4Q96LA9 322 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 OR6C1Q96RD1 312 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 NMES1Q9C002 83 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 SLC6A15Q9H2J7 730 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 EXPH5Q8NEV8 1989 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 PCP4L1A6NKN8 68 aa12.3□□□□□ -0.44
GAPVD1-205ENST00000394084 HOXB5P09067 269 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms