RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RPP14O95059 124 aaKnown RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 APOC1P02654 83 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 MSMBP08118 114 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 EGR1P18146 543 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZFP36P26651 326 aaKnown RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 HTR1FP30939 366 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 CD80P33681 288 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 CSNK2BP67870 215 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ELF3P78545 371 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 LCN2P80188 198 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 SRSF2Q01130 221 aaKnown RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ROM1Q03395 351 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 SLC3A1Q07837 685 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 RCN1Q15293 331 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 LRRC36Q1X8D7 754 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ODF4Q2M2E3 257 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 LPCAT4Q643R3 524 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 SFRP4Q6FHJ7 346 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 KCTD18Q6PI47 426 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZBTB49Q6ZSB9 765 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 PEG10Q86TG7 708 aaKnown RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 GLCCI1Q86VQ1 547 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 COMMD2Q86X83 199 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF679Q8IYX0 411 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 GALNT4Q8N4A0 578 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 DEFB108BQ8NET1 73 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR52H1Q8NGJ2 320 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR8J1Q8NGP2 316 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR51F2Q8NH61 342 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR51E1Q8TCB6 317 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 STMN2Q93045 179 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM186Q96B77 213 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM71F1Q96KD3 344 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 HRASLS5Q96KN8 279 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 PAPOLGQ9BWT3 736 aaKnown RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 MROQ9BYG7 248 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 PBOV1Q9GZY1 135 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 SHARPINQ9H0F6 387 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 METTL17Q9H7H0 456 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 NIPAL2Q9H841 368 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 GPR84Q9NQS5 396 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 C1orf123Q9NWV4 160 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 CLN6Q9NWW5 311 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 MRM2Q9UI43 246 aaKnown RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 GMPPBQ9Y5P6 360 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 CHD3Q12873 2000 aaKnown RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 IGHV3OR15-7A0A075B7D8 119 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 hCG_1807616A0A1W2PRN6 198 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ERICH4A6NGS2 130 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 A6NIN4 97 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 A6NLC8 198 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF850A8MQ14 1090 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 CEACAM18A8MTB9 384 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 P2RY10O00398 339 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 PHF1O43189 567 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 GMDSO60547 372 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 SRSF10O75494 262 aaKnown RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 CLIC3O95833 236 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 AVPP01185 164 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ANPEPP15144 967 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 PEX2P28328 305 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 THBS2P35442 1172 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ATP6V1E1P36543 226 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 PSMB10P40306 273 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 GATA4P43694 442 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 RIDAP52758 137 aaKnown RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 DVL1P1P54792 670 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 GMFBP60983 142 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF85Q03923 595 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 POU4F2Q12837 409 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 PRDX4Q13162 271 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR8B8Q15620 311 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZSCAN26Q16670 478 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 TP53I3Q53FA7 332 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAHD2BQ6P2I3 314 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 LYPD2Q6UXB3 125 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 LIAT1Q6ZQX7 453 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 RHOUQ7L0Q8 258 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 LRRC28Q86X40 367 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 C10orf67Q8IYJ2 551 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ENTHD1Q8IYW4 607 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR11L1Q8NGX0 322 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR8S1Q8NH09 359 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 HPSE2Q8WWQ2 592 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 ASB17Q8WXJ9 295 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 PIGCQ92535 297 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 RAB39BQ96DA2 213 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 SEH1LQ96EE3 360 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 RNFT2Q96EX2 444 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAHD2AQ96GK7 314 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM246Q9BRR3 403 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 OPA3Q9H6K4 179 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 SP140LQ9H930 580 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 FN3KRPQ9HA64 309 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM165Q9HC07 324 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 AMBNQ9NP70 447 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 G6PC2Q9NQR9 355 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 HAO2Q9NYQ3 351 aa6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 WARS2Q9UGM6 360 aaKnown RBP6.43□□□□□ -1.38
HMGB3P1-201ENST00000393368 CDC42EP3Q9UKI2 254 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms