RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PBOV1Q9GZY1 135 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 PARP12Q9H0J9 701 aaKnown RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 GDF2Q9UK05 429 aaPredicted RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 C14orf166Q9Y224 244 aaKnown RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 FAM96BQ9Y3D0 163 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 A0A1W2PR77 199 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 H7C417 338 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 ST8SIA5O15466 376 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 IFNA10P01566 189 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 IGHV3-9P01782 118 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 SULT1A3P0DMM9 295 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 SULT1A4P0DMN0 295 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 TPT1P13693 172 aaKnown RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 PI3P19957 117 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 NME2P22392 152 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 NFYBP25208 207 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 LAP3P28838 519 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 CD80P33681 288 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 KIR3DL2P43630 455 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 LIMK1P53667 647 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 IGLV3-21P80748 117 aaPredicted RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 RHBDD2Q6NTF9 364 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 YRDCQ86U90 279 aaKnown RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 KMT5CQ86Y97 462 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 SPSB2Q99619 263 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 MTFP1Q9UDX5 166 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 PISDQ9UG56 409 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 CDH23Q9H251 3354 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 A0A0D9SG52 128 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 DNASE2O00115 360 aaPredicted RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 RER1O15258 196 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 TUBG1P23258 451 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 CX3CR1P49238 355 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 MECP2P51608 486 aaKnown RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 MEF2DQ14814 521 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 ANKRD16Q6P6B7 361 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 GLDNQ6ZMI3 551 aaPredicted RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 RPS19BP1Q86WX3 136 aaKnown RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 PRSS35Q8N3Z0 413 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 OR2AK2Q8NG84 335 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 RGP1Q92546 391 aaPredicted RBP9.41□□□□□ -0.9
CALD1-203ENST00000393118 ZNF700Q9H0M5 742 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 DCAF16Q9NXF7 216 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 MYOTQ9UBF9 498 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 URGCP-MRPS24S4R325 110 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 CACNA1GO43497 2377 aa9.41□□□□□ -0.9
CALD1-203ENST00000393118 ANKRD20A5PA0PJZ0 165 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 ZNF850A8MQ14 1090 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 MED6O75586 246 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 STK17BO94768 372 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 NDUFB6O95139 128 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 SERPINA5P05154 406 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 FCGR2AP12318 317 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 RBMXP38159 391 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 PI4KAP42356 2102 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 SSR4P51571 173 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 RPS11P62280 158 aaKnown RBP eCLIP9.4□□□□□ -0.9
CALD1-203ENST00000393118 RPS15P62841 145 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 FAM189A2Q15884 450 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 BATF2Q8N1L9 274 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 ZNF501Q96CX3 271 aaPredicted RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 FAM86C1Q9NVL1 165 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 PLEKHJ1Q9NW61 149 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 RAB22AQ9UL26 194 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 FANCMQ8IYD8 2048 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 ZNF106Q9H2Y7 1883 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 PHOX2AO14813 284 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 EIF2S3P41091 472 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 NPY4RP50391 375 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 SLC35A1P78382 337 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 TMEM164Q5U3C3 297 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 NKAIN3Q8N8D7 197 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 ISOC2Q96AB3 205 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 INTS12Q96CB8 462 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 MRPS24Q96EL2 167 aaKnown RBP9.4□□□□□ -0.9
CALD1-203ENST00000393118 ZNF75AQ96N20 296 aa9.4□□□□□ -0.9
CALD1-203ENST00000393118 TSPAN2O60636 221 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 TSPAN15O95858 294 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 MSX1P28360 303 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 BLVRBP30043 206 aaPredicted RBP9.4□□□□□ -0.91
CALD1-203ENST00000393118 PRSS12P56730 875 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 FXYD4P59646 89 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 RPS4XP62701 263 aaKnown RBP9.4□□□□□ -0.91
CALD1-203ENST00000393118 ACTBL2Q562R1 376 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 COL13A1Q5TAT6 717 aaPredicted RBP9.4□□□□□ -0.91
CALD1-203ENST00000393118 SEZ6L2Q6UXD5 910 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 SLAMF9Q96A28 289 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 SPACA9Q96E40 222 aaPredicted RBP9.4□□□□□ -0.91
CALD1-203ENST00000393118 SCGB3A2Q96PL1 93 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 GPX7Q96SL4 187 aaPredicted RBP9.4□□□□□ -0.91
CALD1-203ENST00000393118 WIF1Q9Y5W5 379 aa9.4□□□□□ -0.91
CALD1-203ENST00000393118 IGKV3-11P04433 115 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 HOXB5P09067 269 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 GALNSP34059 522 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 ZNF121P58317 390 aaPredicted RBP9.39□□□□□ -0.91
CALD1-203ENST00000393118 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
CALD1-203ENST00000393118 MUC20Q8N307 709 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms