RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TDGF1P3P51864 188 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 ZNF791Q3KP31 576 aaPredicted RBP16.88■□□□□ 0.29
CCDC50-202ENST00000392456 ELOA3BQ3SY89 546 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 MESTQ5EB52 335 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 ZNF468Q5VIY5 522 aaPredicted RBP16.88■□□□□ 0.29
CCDC50-202ENST00000392456 MRGPREQ86SM8 312 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 ELOA3Q8NG57 546 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 OR2AK2Q8NG84 335 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 NEK7Q8TDX7 302 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 PAQR8Q8TEZ7 354 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 SPACA9Q96E40 222 aaPredicted RBP16.88■□□□□ 0.29
CCDC50-202ENST00000392456 P4HTMQ9NXG6 502 aa16.88■□□□□ 0.29
CCDC50-202ENST00000392456 SFTA3P0C7M3 94 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 LIMS3P0CW19 117 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 LIMS4P0CW20 117 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 P2RX1P51575 399 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 NDUFA6P56556 154 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 ZNF345Q14585 488 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 PRSS45Q7RTY3 260 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 NUP54Q7Z3B4 507 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 RNF138Q8WVD3 245 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 RFKQ969G6 155 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 KTI12Q96EK9 354 aaPredicted RBP16.87■□□□□ 0.29
CCDC50-202ENST00000392456 KRCC1Q9NPI7 259 aaPredicted RBP16.87■□□□□ 0.29
CCDC50-202ENST00000392456 TMEM100Q9NV29 134 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 MED13Q9UHV7 2174 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 UBE2QL1A1L167 161 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 ZC3H12DA2A288 527 aaKnown RBP16.87■□□□□ 0.29
CCDC50-202ENST00000392456 TM4SF5O14894 197 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 HNF1AP20823 631 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 GALP22466 123 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 AGTR1P30556 359 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 ATP6V1E1P36543 226 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 LTBQ06643 244 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 PRAMEF20Q5VT98 475 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 SFXN4Q6P4A7 337 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 SMARCD3Q6STE5 483 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 Q8NFD4 153 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 OR10A7Q8NGE5 316 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 ANKRD10Q9NXR5 420 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 KLRF1Q9NZS2 232 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 DOK5Q9P104 306 aa16.87■□□□□ 0.29
CCDC50-202ENST00000392456 CHCHD2Q9Y6H1 151 aaPredicted RBP16.87■□□□□ 0.29
CCDC50-202ENST00000392456 BHLHE40O14503 412 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 PLGP00747 810 aaPredicted RBP16.86■□□□□ 0.29
CCDC50-202ENST00000392456 CELP19835 753 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 PGGHGQ32M88 737 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 LINC00303Q3SY05 128 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 SIRT6Q8N6T7 355 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 SLC24A4Q8NFF2 622 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 BRIX1Q8TDN6 353 aaKnown RBP16.86■□□□□ 0.29
CCDC50-202ENST00000392456 EXOSC1Q9Y3B2 195 aaKnown RBP16.86■□□□□ 0.29
CCDC50-202ENST00000392456 TIMM10BQ9Y5J6 103 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 IRGMA1A4Y4 181 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 OR2F2O95006 317 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 METTL15P1P0C7V9 234 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 VSIG10L2P0DP72 767 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 MPZP25189 248 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 SLC6A8P48029 635 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 OR2F1Q13607 317 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 RPS19BP1Q86WX3 136 aaKnown RBP16.86■□□□□ 0.29
CCDC50-202ENST00000392456 GTPBP8Q8N3Z3 284 aaPredicted RBP16.86■□□□□ 0.29
CCDC50-202ENST00000392456 PNLDC1Q8NA58 520 aaKnown RBP16.86■□□□□ 0.29
CCDC50-202ENST00000392456 OR2T33Q8NG76 320 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 CACFD1Q9UGQ2 172 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 SH3BGRL2Q9UJC5 107 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 CAMK2AQ9UQM7 478 aa16.86■□□□□ 0.29
CCDC50-202ENST00000392456 A6NJY4 79 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 FAM183AA6NL82 134 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 SHISA8B8ZZ34 492 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 SURF4O15260 269 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 PRODHO43272 600 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 CBFBQ13951 182 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 ASB13Q8WXK3 278 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 METTL7AQ9H8H3 244 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 PLEKHA1Q9HB21 404 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 VDAC3Q9Y277 283 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 NXPH2O95156 264 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 IGHEP01854 428 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 UCHL1P09936 223 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 PNMTP11086 282 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 PGCP20142 388 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 FOXK1P85037 733 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 C17orf67Q0P5P2 114 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 KHDC3LQ587J8 217 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 SLC25A24Q6NUK1 477 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 PEG10Q86TG7 708 aaKnown RBP16.85■□□□□ 0.29
CCDC50-202ENST00000392456 FAM24BQ8N5W8 94 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 BBS1Q8NFJ9 593 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 NKD1Q969G9 470 aa16.85■□□□□ 0.29
CCDC50-202ENST00000392456 A0A0G2JK05 382 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 MAS1LP35410 378 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 CDKN1BP46527 198 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 MTNR1AP48039 350 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 GSK3AP49840 483 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 OR10A3P58181 314 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 ACTBL2Q562R1 376 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 SLC36A1Q7Z2H8 476 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 ZNF664Q8N3J9 261 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 OR10AD1Q8NGE0 317 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 481.8 ms