RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 J3KTA2 159 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 SP1P08047 785 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 TMEM123Q8N131 208 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 WDR1O75083 606 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 HIST1H1EP10412 219 aaKnown RBP13.41□□□□□ -0.26
CCDC50-201ENST00000392455 SIX1Q15475 284 aaPredicted RBP13.41□□□□□ -0.26
CCDC50-201ENST00000392455 NKAIN2Q5VXU1 208 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 BAP18Q8IXM2 172 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 TEX29Q8N6K0 151 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 TWSG1Q9GZX9 223 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 PPP1R3CQ9UQK1 317 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 ACOD1A6NK06 481 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 PAFAH1B2P68402 229 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 HTRA3P83110 453 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 CRYAAP02489 173 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 F13BP05160 661 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 OR1C1Q15619 314 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 PIANPQ8IYJ0 282 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 BCL7CQ8WUZ0 217 aaPredicted RBP13.41□□□□□ -0.26
CCDC50-201ENST00000392455 TLCD2A6NGC4 264 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 ISLRO14498 428 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 BPIFA4PQ86YQ2 179 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF775Q96BV0 537 aaPredicted RBP13.41□□□□□ -0.26
CCDC50-201ENST00000392455 PHYHIPLQ96FC7 376 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 SLC30A3Q99726 388 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 IL17CQ9P0M4 197 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 MOB4Q9Y3A3 225 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 C4BP0C0L5 1744 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 GPX3P22352 226 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 TMED7-TICAM2A0A0A6YYA0 188 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 IGSF23A1L1A6 192 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 AQP8O94778 261 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 FAM3AP98173 230 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
CCDC50-201ENST00000392455 TMEM167BQ9NRX6 74 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 TMED7Q9Y3B3 224 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 SCN4AP35499 1836 aa13.41□□□□□ -0.26
CCDC50-201ENST00000392455 KIR3DL2P43630 455 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 CLDN10P78369 228 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 TOMM34Q15785 309 aaPredicted RBP13.4□□□□□ -0.26
CCDC50-201ENST00000392455 TMED3Q9Y3Q3 217 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 BCL2L11O43521 198 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 KRASP01116 189 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 TBXA2RP21731 343 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 NAA60Q9H7X0 242 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 IGKV6-21A0A0C4DH24 114 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 GCAP28676 217 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 CTSCP53634 463 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 OR52I1Q8NGK6 324 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 SLC38A5Q8WUX1 472 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 DYRK2Q92630 601 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 MOGAT1Q96PD6 335 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 SLC35B3Q9H1N7 401 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 IGKV6D-21A0A0A0MT36 114 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 FCN1O00602 326 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 PRRX1P54821 245 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 CLDN15P56746 228 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 PRDX1Q06830 199 aaKnown RBP13.4□□□□□ -0.26
CCDC50-201ENST00000392455 LCN15Q6UWW0 184 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 ZDHHC23Q8IYP9 409 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 GMLQ99445 158 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 POMT2Q9UKY4 750 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 MEIKINA0A087WXM9 373 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 IL2RAP01589 272 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 SLC35E2P0CK97 266 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 PMS2P11Q13670 270 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 TMEM241Q24JQ0 296 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 TMEFF1Q8IYR6 380 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 FER1L5A0AVI2 2057 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 CORTO00230 105 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 PRSS1P07477 247 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 ALOX5APP20292 161 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 OR1D5P58170 312 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 C17orf99Q6UX52 265 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 YRDCQ86U90 279 aaKnown RBP13.4□□□□□ -0.26
CCDC50-201ENST00000392455 SLC46A2Q9BY10 475 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 ASH2LQ9UBL3 628 aa13.4□□□□□ -0.26
CCDC50-201ENST00000392455 ASCL1P50553 236 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 CTBSQ01459 385 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 OR2I1PQ8NGU4 316 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 GATA6Q92908 595 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 MMP11P24347 488 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 STXBP6Q8NFX7 210 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 C2CD4CQ8TF44 421 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 OR8B4Q96RC9 309 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 CDC42EP3Q9UKI2 254 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 SLC5A6Q9Y289 635 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 N4BP2Q86UW6 1770 aaPredicted RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 DRGXA6NNA5 263 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 RPLP1P05386 114 aaKnown RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 DCXRQ7Z4W1 244 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 OR52N4Q8NGI2 321 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 NMNAT3Q96T66 252 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 ZNF2Q9BSG1 426 aaPredicted RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM204Q9BSN7 226 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 SH2D2AQ9NP31 389 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 SLC17A5Q9NRA2 495 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 C1SP09871 688 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms