RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ELFN2Q5R3F8 820 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 SVBPQ8N300 66 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 OR10S1Q8NGN2 331 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 EDARADDQ8WWZ3 215 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 TMEM9BQ9NQ34 198 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 ZNF275Q9NSD4 429 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-201ENST00000380829 CCDC187A0A096LP49 1063 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 SNAPINO95295 136 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 SERPINA7P05543 415 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 RFPL3SP0C7P2 107 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 TMIGD3P0DMS9 266 aaPredicted RBP12.61□□□□□ -0.39
CLCN4-201ENST00000380829 PTAFRP25105 342 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 NPBWR1P48145 328 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 BEX5Q5H9J7 111 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 AVPI1Q5T686 147 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 TMEM164Q5U3C3 297 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 C11orf88Q6PI97 169 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 OR1S2Q8NGQ3 325 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 THAP6Q8TBB0 222 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 THOC3Q96J01 351 aaKnown RBP12.61□□□□□ -0.39
CLCN4-201ENST00000380829 MIOXQ9UGB7 285 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 LHFPL6Q9Y693 200 aa12.61□□□□□ -0.39
CLCN4-201ENST00000380829 A0A0J9YW62 118 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 LOC107986453A0A1B0GWG9 222 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 CTDSPLO15194 276 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 LMX1BO60663 402 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 SMIM6P0DI80 62 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 CALCBP10092 127 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 ART1P52961 327 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 ZNF239Q16600 458 aaKnown RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 H3F3CQ6NXT2 135 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 SLC25A47Q6Q0C1 308 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 PLPP7Q8NBV4 271 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 PSMF1Q92530 271 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 CMTM3Q96MX0 182 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 ZNF385AQ96PM9 386 aaKnown RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 PIGQQ9BRB3 760 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 PDCD10Q9BUL8 212 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 KCNK15Q9H427 330 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DEPPQ9NTK1 212 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 ASF1BQ9NVP2 202 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 TAS2R4Q9NYW5 299 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 PCDHB10Q9UN67 800 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 A0A1B0GW55 424 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 MEX3AA1L020 520 aaKnown RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 TMEM218A2RU14 115 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 P2RY10O00398 339 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 KRT33AO76009 404 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 RLN1P04808 185 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 ITGA5P08648 1049 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DUX4L2P0CJ85 424 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DUX4L3P0CJ86 424 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DUX4L4P0CJ87 422 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DUX4L5P0CJ88 424 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DUX4L6P0CJ89 424 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DUX4L7P0CJ90 424 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 NFYBP25208 207 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 MOB3CQ70IA8 216 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 MUC20Q8N307 709 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 OR13C3Q8NGS6 347 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 OR14L1PQ8NHC6 308 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 SRXN1Q9BYN0 137 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 C1orf198Q9H425 327 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 ASH2LQ9UBL3 628 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DUX4Q9UBX2 424 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 STEAP1Q9UHE8 339 aa12.6□□□□□ -0.39
CLCN4-201ENST00000380829 EP300Q09472 2414 aaPredicted RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 PHF3Q92576 2039 aaKnown RBP12.6□□□□□ -0.39
CLCN4-201ENST00000380829 DOCK10Q96BY6 2186 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 ZNF17P17021 662 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 CDK2P24941 298 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 BDKRB2P30411 391 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 CYB561P49447 251 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 RAC1P63000 192 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 DEGS2Q6QHC5 323 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 BAIAP2L2Q6UXY1 529 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 OR2W3Q7Z3T1 314 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 OR2AK2Q8NG84 335 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 OR51D1Q8NGF3 324 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 S100A16Q96FQ6 103 aaKnown RBP12.59□□□□□ -0.39
CLCN4-201ENST00000380829 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 ZNF230Q9UIE0 474 aaPredicted RBP12.59□□□□□ -0.39
CLCN4-201ENST00000380829 HHLA2Q9UM44 414 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 FOXJ3Q9UPW0 622 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 NCKAP5O14513 1909 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 LOC102725191A0A1B0GVB3 256 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 UBE2QL1A1L167 161 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 LRRC3CA6NJW4 275 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 SNRPGP15A8MWD9 76 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 GABARAPH6UMI1 98 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 TRAPPC6AO75865 159 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 NDUFB6O95139 128 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 CD2P06729 351 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 UBBP0CG47 229 aa12.59□□□□□ -0.39
CLCN4-201ENST00000380829 UBCP0CG48 685 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms