RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 A0A1B0GVI7 797 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 TRIM64CA6NLI5 447 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 SYT7O43581 403 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 PLPP2O43688 288 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 HSMCR30P0CW71 290 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 SELEP16581 610 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 ALDH3B1P43353 468 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 MMP15P51511 669 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 MLLT11Q13015 90 aaPredicted RBP16.05■□□□□ 0.16
SMN2-202ENST00000380742 KCTD8Q6ZWB6 473 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 DOK3Q7L591 496 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 OR14K1Q8NGZ2 314 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 RGP1Q92546 391 aaPredicted RBP16.05■□□□□ 0.16
SMN2-202ENST00000380742 GTF3AQ92664 365 aaKnown RBP16.05■□□□□ 0.16
SMN2-202ENST00000380742 GHSRQ92847 366 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 OPALINQ96PE5 141 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 ISYNA1Q9NPH2 558 aa16.05■□□□□ 0.16
SMN2-202ENST00000380742 LOC390937A0A1W2PQ73 354 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 LMX1BO60663 402 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 DHRS3O75911 302 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 SMIM18P0DKX4 95 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 ATP6V1B1P15313 513 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 ACHEP22303 614 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 NKPD1Q17RQ9 610 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 Q6ZR03 302 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 OR51A4Q8NGJ6 313 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 COMMD4Q9H0A8 199 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 V9GYS6 101 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 AKAP6Q13023 2319 aa16.04■□□□□ 0.16
SMN2-202ENST00000380742 MTRF1O75570 445 aaKnown RBP16.03■□□□□ 0.16
SMN2-202ENST00000380742 INMTO95050 263 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 NAT2P11245 290 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 DDOSTP39656 456 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 MAP2K3P46734 347 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 SNRPD2P62316 118 aaKnown RBP16.03■□□□□ 0.16
SMN2-202ENST00000380742 TPBGQ13641 420 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 NEDD8Q15843 81 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 MOGQ16653 247 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 LIPKQ5VXJ0 399 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 ZCCHC24Q8N2G6 241 aaKnown RBP16.03■□□□□ 0.16
SMN2-202ENST00000380742 SEMA6DQ8NFY4 1073 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 OR8G5Q8NG78 346 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 FCGR1BQ92637 280 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 MSL2Q9HCI7 577 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 HHLA2Q9UM44 414 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 ZNF281Q9Y2X9 895 aa16.03■□□□□ 0.16
SMN2-202ENST00000380742 UNC79Q9P2D8 2635 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 ZSCAN5BA6NJL1 495 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 M0R233 179 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 CD1AP06126 327 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 RPSAP08865 295 aaKnown RBP16.02■□□□□ 0.16
SMN2-202ENST00000380742 CPEP16870 476 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 MAGEB1P43366 347 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 RPS11P62280 158 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMN2-202ENST00000380742 ARMCX4Q5H9R4 360 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 PAMR1Q6UXH9 720 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 CSNK2A3Q8NEV1 391 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 OR13C5Q8NGS8 318 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 UFD1Q92890 307 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 SLC30A2Q9BRI3 323 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 CACNG6Q9BXT2 260 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 PPP1R3EQ9H7J1 279 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 ASH1LQ9NR48 2969 aaKnown RBP16.02■□□□□ 0.16
SMN2-202ENST00000380742 PIGLQ9Y2B2 252 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 RHBDD3Q9Y3P4 386 aa16.02■□□□□ 0.16
SMN2-202ENST00000380742 PLSCR5A0PG75 271 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 MAGEA13PA6NCF6 341 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 A6NIN4 97 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 FAHP16930 419 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 CD53P19397 219 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 PSMB9P28065 219 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 LIPAP38571 399 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 RIPPLY1Q0D2K3 151 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 GPR50Q13585 617 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 TSTQ16762 297 aaKnown RBP16.01■□□□□ 0.15
SMN2-202ENST00000380742 CCDC54Q8NEL0 328 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 ITFG2Q969R8 447 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 CCL19Q99731 98 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 DYNLRB1Q9NP97 96 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 MRPL15Q9P015 296 aaKnown RBP16.01■□□□□ 0.15
SMN2-202ENST00000380742 GPR160Q9UJ42 338 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 ABCA12Q86UK0 2595 aa16.01■□□□□ 0.15
SMN2-202ENST00000380742 A0A1B0GWJ7 208 aa16■□□□□ 0.15
SMN2-202ENST00000380742 DHRS7CA6NNS2 312 aa16■□□□□ 0.15
SMN2-202ENST00000380742 H0YL77 283 aa16■□□□□ 0.15
SMN2-202ENST00000380742 OVOL3O00110 214 aa16■□□□□ 0.15
SMN2-202ENST00000380742 MLNRO43193 412 aa16■□□□□ 0.15
SMN2-202ENST00000380742 ZNF12P17014 697 aa16■□□□□ 0.15
SMN2-202ENST00000380742 CA6P23280 308 aa16■□□□□ 0.15
SMN2-202ENST00000380742 CDKN1AP38936 164 aa16■□□□□ 0.15
SMN2-202ENST00000380742 PPOXP50336 477 aa16■□□□□ 0.15
SMN2-202ENST00000380742 ZNF81P51508 661 aa16■□□□□ 0.15
SMN2-202ENST00000380742 SSX1Q16384 188 aa16■□□□□ 0.15
SMN2-202ENST00000380742 YIF1BQ5BJH7 314 aa16■□□□□ 0.15
SMN2-202ENST00000380742 SYT6Q5T7P8 510 aaPredicted RBP16■□□□□ 0.15
SMN2-202ENST00000380742 KRT74Q7RTS7 529 aa16■□□□□ 0.15
SMN2-202ENST00000380742 PHC2Q8IXK0 858 aa16■□□□□ 0.15
SMN2-202ENST00000380742 OR13C3Q8NGS6 347 aa16■□□□□ 0.15
SMN2-202ENST00000380742 GPR148Q8TDV2 347 aa16■□□□□ 0.15
SMN2-202ENST00000380742 MUL1Q969V5 352 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms