RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 ASCL1P50553 236 aa13.74□□□□□ -0.21
BRF1-203ENST00000379937 C6orf15Q6UXA7 325 aaPredicted RBP13.74□□□□□ -0.21
BRF1-203ENST00000379937 TUSC5Q8IXB3 177 aa13.74□□□□□ -0.21
BRF1-203ENST00000379937 GPR137CQ8N3F9 429 aa13.74□□□□□ -0.21
BRF1-203ENST00000379937 ZNF488Q96MN9 340 aa13.74□□□□□ -0.21
BRF1-203ENST00000379937 EDEM2Q9BV94 578 aa13.74□□□□□ -0.21
BRF1-203ENST00000379937 PRO3102Q9H379 93 aa13.74□□□□□ -0.21
BRF1-203ENST00000379937 NIPAL2Q9H841 368 aa13.74□□□□□ -0.21
BRF1-203ENST00000379937 PRMT8Q9NR22 394 aaPredicted RBP13.74□□□□□ -0.21
BRF1-203ENST00000379937 ZNF275Q9NSD4 429 aaPredicted RBP13.74□□□□□ -0.21
BRF1-203ENST00000379937 C9orf172C9J069 976 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 M0R135 149 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 NKX2-8O15522 239 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 XRCC3O43542 346 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 MPC2O95563 127 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 MAP2K6P52564 334 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 ELP2Q6IA86 826 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 ZNF813Q6ZN06 617 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 PPP1R32Q7Z5V6 425 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 CXorf67Q86X51 503 aaPredicted RBP13.73□□□□□ -0.21
BRF1-203ENST00000379937 ZNF799Q96GE5 643 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 TFF1P04155 84 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 TRAPPC2P0DI81 140 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 TRAPPC2BP0DI82 140 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 S100A10P60903 97 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 EMC4Q5J8M3 183 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 SLC16A14Q7RTX9 510 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 KMT5CQ86Y97 462 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 C9orf62Q8N4C0 152 aa13.73□□□□□ -0.21
BRF1-203ENST00000379937 TRBV5-5A0A0J9YX44 114 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 A0A1W2PQD3 144 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 TMEM82A0PJX8 343 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 WIPF3A6NGB9 483 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 C1QBP02746 253 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 OR3A3P47888 321 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 OR3A2P47893 321 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 EXOSC2Q13868 293 aaKnown RBP13.72□□□□□ -0.21
BRF1-203ENST00000379937 OR9K2Q8NGE7 335 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 OR5T2Q8NGG2 359 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 A6NIZ1 184 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 OR6C76A6NM76 312 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 M0R296 226 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 TXNDC12O95881 172 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 CAPZA1P52907 286 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 AP3S2P59780 193 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 RAP1BP61224 184 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 RAP1AP62834 184 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 STK11Q15831 433 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 C1QTNF12Q5T7M4 302 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 ANKRD16Q6P6B7 361 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 ELP5Q8TE02 316 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 SCMH1Q96GD3 660 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 FAAP24Q9BTP7 215 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 PROK2Q9HC23 129 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 METTL21EPA6NDL7 271 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 DHHO43323 396 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 LIFP15018 202 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 CSNK2A1P68400 391 aaPredicted RBP13.72□□□□□ -0.21
BRF1-203ENST00000379937 TMEM244Q5VVB8 128 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 CSNK2A3Q8NEV1 391 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 TMEM59Q9BXS4 323 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 CST11Q9H112 138 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 IL36RNQ9UBH0 155 aa13.72□□□□□ -0.21
BRF1-203ENST00000379937 CENPBD1B2RD01 187 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 AGPAT2O15120 278 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 AKAIN1P0CW23 69 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 ACKR3P25106 362 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 HGFACQ04756 655 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 UBE2V2Q15819 145 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 ALKBH6Q3KRA9 238 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 PIGYQ3MUY2 71 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 CREB3L2Q70SY1 520 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 ADGRE4PQ86SQ3 457 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 CNEP1R1Q8N9A8 125 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 DTWD2Q8NBA8 298 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 CLEC1AQ8NC01 280 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 OXGR1Q96P68 337 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 INTS1Q8N201 2190 aaKnown RBP13.71□□□□□ -0.21
BRF1-203ENST00000379937 ANKRD20A5PA0PJZ0 165 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 ZNF208O43345 1280 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 RAD51DO75771 328 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 ERCC1P07992 297 aaPredicted RBP13.71□□□□□ -0.21
BRF1-203ENST00000379937 AMY2BP19961 511 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 IL13RA1P78552 427 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 TMEM164Q5U3C3 297 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 SEZ6L2Q6UXD5 910 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 ZNF680Q8NEM1 530 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 STEAP2Q8NFT2 490 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 RNF133Q8WVZ7 376 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 ASB17Q8WXJ9 295 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 RAB3CQ96E17 227 aa13.71□□□□□ -0.21
BRF1-203ENST00000379937 CUBNO60494 3623 aa13.71□□□□□ -0.22
BRF1-203ENST00000379937 IGKV1-9A0A0C4DH69 117 aa13.7□□□□□ -0.22
BRF1-203ENST00000379937 C5orf49A4QMS7 147 aa13.7□□□□□ -0.22
BRF1-203ENST00000379937 OR7C1O76099 320 aaPredicted RBP13.7□□□□□ -0.22
BRF1-203ENST00000379937 CSTBP04080 98 aaKnown RBP13.7□□□□□ -0.22
BRF1-203ENST00000379937 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
BRF1-203ENST00000379937 PAQR4Q8N4S7 273 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms