RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 BIN3Q9NQY0 253 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 DOCK10Q96BY6 2186 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 CELSR3Q9NYQ7 3312 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 PLATP00750 562 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 TPOP07202 933 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 GABRA1P14867 456 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 ANXA7P20073 488 aaKnown RBP13.09□□□□□ -0.31
PRNP-201ENST00000379440 VAMP1P23763 118 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 NTF4P34130 210 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 SUCLG1P53597 346 aaKnown RBP13.09□□□□□ -0.31
PRNP-201ENST00000379440 DMRTC1Q5HYR2 192 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 DHRS13Q6UX07 377 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 NKAIN3Q8N8D7 197 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 SORCS2Q96PQ0 1159 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 SLC5A6Q9Y289 635 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 RTTNQ86VV8 2226 aa13.09□□□□□ -0.31
PRNP-201ENST00000379440 OR5H15A6NDH6 313 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 KRBOX1C9JBD0 128 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 S100A9P06702 114 aaKnown RBP13.08□□□□□ -0.31
PRNP-201ENST00000379440 GTF2F2P13984 249 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 MSR1P21757 451 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 S100PP25815 95 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.31
PRNP-201ENST00000379440 ENDOGQ14249 297 aaKnown RBP13.08□□□□□ -0.31
PRNP-201ENST00000379440 C10orf128Q5T292 105 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 GGNQ86UU5 652 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 OR5D14Q8NGL3 314 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 ROBO4Q8WZ75 1007 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 FAM46BQ96A09 425 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 NABP1Q96AH0 204 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 LIN37Q96GY3 246 aaPredicted RBP13.08□□□□□ -0.31
PRNP-201ENST00000379440 NELFAQ9H3P2 528 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 TMEM138Q9NPI0 162 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 UFSP2Q9NUQ7 469 aa13.08□□□□□ -0.31
PRNP-201ENST00000379440 DHHO43323 396 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 MT-CO3P00414 261 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 CD3DP04234 171 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 PMPCAQ10713 525 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 CDCP2Q5VXM1 449 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 PAQR4Q8N4S7 273 aaPredicted RBP13.08□□□□□ -0.32
PRNP-201ENST00000379440 ACBD4Q8NC06 268 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 GPX8Q8TED1 209 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 FOXRED1Q96CU9 486 aaPredicted RBP13.08□□□□□ -0.32
PRNP-201ENST00000379440 SEH1LQ96EE3 360 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 SFXN2Q96NB2 322 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 PAPOLGQ9BWT3 736 aaKnown RBP13.08□□□□□ -0.32
PRNP-201ENST00000379440 UBQLN2Q9UHD9 624 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 KNTC1P50748 2209 aa13.08□□□□□ -0.32
PRNP-201ENST00000379440 GJE1A6NN92 205 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 CXCL13O43927 109 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 NDUFB6O95139 128 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 CSF1P09603 554 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 SULT1A3P0DMM9 295 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 SULT1A4P0DMN0 295 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 RAC2P15153 192 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 ZNF20P17024 532 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 CARD18P57730 90 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 RAC3P60763 192 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 ZP1P60852 638 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 LSM6P62312 80 aaKnown RBP13.07□□□□□ -0.32
PRNP-201ENST00000379440 RSPO4Q2I0M5 234 aaPredicted RBP13.07□□□□□ -0.32
PRNP-201ENST00000379440 GTF3AQ92664 365 aaKnown RBP13.07□□□□□ -0.32
PRNP-201ENST00000379440 MS4A7Q9GZW8 240 aaPredicted RBP13.07□□□□□ -0.32
PRNP-201ENST00000379440 MOB1AQ9H8S9 216 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 FOXD3Q9UJU5 478 aaPredicted RBP13.07□□□□□ -0.32
PRNP-201ENST00000379440 WIPF3A6NGB9 483 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 F5H5K5 113 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 ZNF806P0C7X5 589 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 ANXA3P12429 323 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 PTAFRP25105 342 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 RFC3P40938 356 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 CLDN15P56746 228 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 UNC119Q13432 240 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 CMBLQ96DG6 245 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 ULBP2Q9BZM5 246 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 ZFP64Q9NPA5 681 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 LRFN1Q9P244 771 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 KCNMB2Q9Y691 235 aa13.07□□□□□ -0.32
PRNP-201ENST00000379440 hCG_1807616A0A1W2PRN6 198 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 PYCARD-AS1I3L0S3 204 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 NR2C1P13056 603 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 GDF1P27539 372 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 CD96P40200 585 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 ZNF529Q6P280 563 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 FGD2Q7Z6J4 655 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 SLC22A24Q8N4F4 322 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 OR11H4Q8NGC9 324 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 OR51S1Q8NGJ8 323 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 TAS2R8Q9NYW2 309 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 ZNF133P52736 654 aaPredicted RBP13.06□□□□□ -0.32
PRNP-201ENST00000379440 GRB2P62993 217 aaKnown RBP13.06□□□□□ -0.32
PRNP-201ENST00000379440 RSPO1Q2MKA7 263 aaPredicted RBP13.06□□□□□ -0.32
PRNP-201ENST00000379440 PAN3Q58A45 887 aaKnown RBP13.06□□□□□ -0.32
PRNP-201ENST00000379440 TMEM164Q5U3C3 297 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 OVCH2Q7RTZ1 564 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 ANGPTL5Q86XS5 388 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 DTX1Q86Y01 620 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 C20orf196Q8IYI0 205 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 CLEC1AQ8NC01 280 aa13.06□□□□□ -0.32
PRNP-201ENST00000379440 GJC3Q8NFK1 279 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms