RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PRELID3BQ9Y3B1 194 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 J3KRW8 73 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CALCRP30988 508 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 TMEM268Q5VZI3 342 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF626Q68DY1 528 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 USP51Q70EK9 711 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 MAML2Q8IZL2 1156 aaPredicted RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 SIGLECL1Q8N7X8 197 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 RPUSD4Q96CM3 377 aaKnown RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF385DQ9H6B1 395 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 SIRT5Q9NXA8 310 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CCL21O00585 134 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 RNF224P0DH78 156 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 EPXP11678 715 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 INSL4Q14641 139 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF230Q9UIE0 474 aaPredicted RBP10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 POMT2Q9UKY4 750 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF727A8MUV8 499 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 H7BYZ3 331 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ST3GAL2Q16842 350 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF766Q5HY98 468 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ESRP2Q9H6T0 727 aaKnown RBP10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 TMEFF2Q9UIK5 374 aaPredicted RBP10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 PRSS37A4D1T9 235 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 E5RGE8 158 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 CTSLP07711 333 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 NTF3P20783 257 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 BAP18Q8IXM2 172 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 PLPP6Q8IY26 295 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 C11orf40Q8WZ69 217 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 RPP25Q9BUL9 199 aaKnown RBP10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 JAM3Q9BX67 310 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ASH2LQ9UBL3 628 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 NSG2Q9Y328 171 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 HS3ST3A1Q9Y663 406 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 SLCO1B1Q9Y6L6 691 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 PATE3B3GLJ2 98 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ABCD4O14678 606 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 PRPH2P23942 346 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 CSF2RBP32927 897 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 STPG1Q5TH74 334 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 KCNE3Q9Y6H6 103 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 FXYD1O00168 92 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 TNFSF11O14788 317 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 SPRY3O43610 288 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 OPRM1P35372 400 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 RAE1P78406 368 aaKnown RBP10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 SLC17A1Q14916 467 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 OR8D4Q8NGM9 314 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 ROBO4Q8WZ75 1007 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 SEH1LQ96EE3 360 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 C12orf10Q9HB07 376 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 RNF150Q9ULK6 438 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
PCDHA9-201ENST00000378122 RFPL4AA6NLU0 287 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 RFPL4AL1F8VTS6 287 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 SUMO1P63165 101 aaKnown RBP10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 THEM4Q5T1C6 240 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 ZNF485Q8NCK3 441 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 SLC24A4Q8NFF2 622 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 BARHL1Q9BZE3 327 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 WNT16Q9UBV4 365 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 POM121BA6NF01 834 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 PRRT4C9JH25 899 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 GPNMBQ14956 572 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 OR8G1Q15617 311 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 MOGAT2Q3SYC2 334 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 FHL5Q5TD97 284 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 C11orf87Q6NUJ2 197 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 CALHM3Q86XJ0 350 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 RTL8AQ9BWD3 113 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 KIAA1456Q9P272 454 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 RNASEK-C17orf49H0YIS7 233 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 ANGPTL7O43827 346 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 PDGFBP01127 241 aaPredicted RBP10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 SMUG1Q53HV7 270 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 ARIH2OSQ8N7S6 290 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 TMEM229BQ8NBD8 167 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 CMTM2Q8TAZ6 248 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 TOLLIPQ9H0E2 274 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 A4GNTQ9UNA3 340 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 TRAV1-2A0A0B4J238 106 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 WNT1P04628 370 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 PCBP3P57721 371 aaKnown RBP10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 C12orf73Q69YU5 71 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 THNSL2Q86YJ6 484 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 CCL4L1Q8NHW4 92 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 MOB1AQ9H8S9 216 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 KCNIP2Q9NS61 270 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 FOXJ3Q9UPW0 622 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 GLAP06280 429 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 FABP1P07148 127 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 CRYBB2P43320 205 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 DPTQ07507 201 aa10.82□□□□□ -0.68
PCDHA9-201ENST00000378122 ELAVL1Q15717 326 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms